Krampis, Konstantinos

Publications

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selected publications

Epigenome-Wide Study Identifies Epigenetic Outliers in Normal Mucosa of Patients with Colorectal Cancer. Cancer prevention research (Philadelphia, Pa.). 2022 Academic Article GET IT
Times cited: 7
DNA metabarcoding reveals that coyotes in New York City consume wide variety of native prey species and human food. PeerJ. 2022 Academic Article GET IT
Times cited: 17
Cascading effects of habitat loss on ectoparasite-associated bacterial microbiomes. ISME communications. 2022 Academic Article GET IT
Democratizing bioinformatics through easily accessible software platforms for non-experts in the field. BioTechniques. 2022 Editorial Article GET IT
Times cited: 6
VenomFlow: An Automated Bioinformatic Pipeline for Identification of Disulfide-Rich Peptides from Venom Arsenals. Methods in molecular biology (Clifton, N.J.). 2022 Academic Article GET IT
You are more than what you eat: potentially adaptive enrichment of microbiome functions across bat dietary niches. Animal microbiome. 2021 Academic Article GET IT
Times cited: 26
MicroRNA-1205 Regulation of FRYL in Prostate Cancer. Frontiers in cell and developmental biology. 2021 Academic Article GET IT
Molecular diet analysis of neotropical bats based on fecal DNA metabarcoding. Ecology and evolution. 2021 Academic Article GET IT
Times cited: 64
Baseline human gut microbiota profile in healthy people and standard reporting template. PloS one. 2019 Academic Article GET IT
Times cited: 176
MGS-Fast: Metagenomic shotgun data fast annotation using microbial gene catalogs. GigaScience. 2019 Academic Article GET IT
Times cited: 21
miCloud: A Plug-n-Play, Extensible, On-Premises Bioinformatics Cloud for Seamless Execution of Complex Next-Generation Sequencing Data Analysis Pipelines. Journal of computational biology : a journal of computational molecular cell biology. 2019 Academic Article GET IT
Times cited: 1
Enabling precision medicine via standard communication of HTS provenance, analysis, and results. PLoS biology. 2018 Academic Article GET IT
Times cited: 23
Genotyping and Quantifying Lyme Pathogen Strains by Deep Sequencing of the Outer Surface Protein C (ospC) Locus. Journal of clinical microbiology. 2018 Academic Article GET IT
Times cited: 18
Comparing Microbiome Sampling Methods in a Wild Mammal: Fecal and Intestinal Samples Record Different Signals of Host Ecology, Evolution. Frontiers in microbiology. 2018 Academic Article GET IT
Times cited: 120
RSEQREP: RNA-Seq Reports, an open-source cloud-enabled framework for reproducible RNA-Seq data processing, analysis, and result reporting. F1000Research. 2017 Academic Article GET IT
Times cited: 6
Bio-Docklets: virtualization containers for single-step execution of NGS pipelines. GigaScience. 2017 Academic Article GET IT
Times cited: 15
Fibronectin and androgen receptor expression data in prostate cancer obtained from a RNA-sequencing bioinformatics analysis. Data in brief. 2017 Academic Article GET IT
Times cited: 5
miR-1207-3p regulates the androgen receptor in prostate cancer via FNDC1/fibronectin. Experimental cell research. 2016 Academic Article GET IT
Times cited: 54
Visual Omics Explorer (VOE): a cross-platform portal for interactive data visualization. Bioinformatics (Oxford, England). 2016 Academic Article GET IT
Times cited: 6
In Vitro Mutational and Bioinformatics Analysis of the M71 Odorant Receptor and Its Superfamily. PloS one. 2015 Academic Article GET IT
Times cited: 9

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Background

education and training

Ph.D., Virginia Polytechnic Institute 2009
M.Sc., University of Athens (Greece) 2003
B.Sc., University of Athens (Greece) 2001

Contact

full name

Konstantinos Krampis

primary email

kok2006@med.cornell.edu

VIVO Weill Cornell Medical College

Konstantinos Krampis Adjunct Assistant Professor of Systems and Computational Biomedicine

Publications

selected publications

Background

education and training

Contact

full name

primary email