selected publications
- A spatial long-read approach at near-single-cell resolution reveals developmental regulation of splicing and polyadenylation sites in distinct cortical layers and cell types. Nature communications. 2025 Academic Article GET IT
- Spatial isoform sequencing at sub-micrometer single-cell resolution reveals novel patterns of spatial isoform variability in brain cell types. 2025 GET IT
- A spatial long-read approach at near-single-cell resolution reveals developmental regulation of splicing and polyadenylation sites in distinct cortical layers and cell types. 2025 GET IT
- Predicting cell population-specific gene expression from genomic sequence. Frontiers in bioinformatics. 2024 Academic Article GET IT
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Single-cell reference mapping to construct and extend cell-type hierarchies.
NAR genomics and bioinformatics.
2023
Academic Article
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Times cited: 11 -
Cell type matching across species using protein embeddings and transfer learning.
Bioinformatics (Oxford, England).
2023
Academic Article
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Times cited: 2 -
Hierarchical progressive learning of cell identities in single-cell data.
Nature communications.
2021
Academic Article
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Times cited: 28 -
A comparison of automatic cell identification methods for single-cell RNA sequencing data.
Genome biology.
2019
Academic Article
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Times cited: 381 -
BrainScope: interactive visual exploration of the spatial and temporal human brain transcriptome.
Nucleic acids research.
2017
Academic Article
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Times cited: 29