selected publications
- Comparative genomics of Borrelia lusitaniae. G3 (Bethesda, Md.). 2026 Academic Article GET IT
- Polyvalent mRNA vaccine targeting outer surface protein C affords multi-strain protection against Lyme disease. NPJ vaccines. 2025 Academic Article GET IT
- A cancer persistent DNA repair circuit driven by MDM2, MDM4 (MDMX), and mutant p53 for recruitment of MDC1 and 53BP1 on chromatin. Nucleic acids research. 2025 Academic Article GET IT
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Natural selection and recombination at host-interacting lipoprotein loci drive genome diversification of Lyme disease and related bacteria.
mBio.
2024
Academic Article
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Times cited: 5 - A CANCER PERSISTENT DNA REPAIR CIRCUIT DRIVEN BY MDM2, MDM4 (MDMX), AND MUTANT P53 FOR RECRUITMENT OF MDC1 AND 53BP1 TO CHROMATIN. 2024 GET IT
- Quantity of questing black-legged ticks and associated micro-scale environmental data collected from four Suburban Parks near New York City. Data in brief. 2023 Academic Article GET IT
- Novelty Search Promotes Antigenic Diversity in Microbial Pathogens. Pathogens (Basel, Switzerland). 2023 Academic Article GET IT
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Genomic Confirmation of Borrelia garinii, United States.
Emerging infectious diseases.
2023
Academic Article
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Times cited: 10 -
Evolution of the vls Antigenic Variability Locus of the Lyme Disease Pathogen and Development of Recombinant Monoclonal Antibodies Targeting Conserved VlsE Epitopes.
Microbiology spectrum.
2022
Academic Article
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Times cited: 3 -
Maximum antigen diversification in a lyme bacterial population and evolutionary strategies to overcome pathogen diversity.
The ISME journal.
2021
Academic Article
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Times cited: 9 -
Multipartite Genome of Lyme Disease Borrelia: Structure, Variation and Prophages.
Current issues in molecular biology.
2020
Academic Article
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Times cited: 43 -
Population Differentiation at the PVT1 Gene Locus: Implications for Prostate Cancer.
G3 (Bethesda, Md.).
2020
Academic Article
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Times cited: 9 -
Systems-level analysis of NalD mutation, a recurrent driver of rapid drug resistance in acute Pseudomonas aeruginosa infection.
PLoS computational biology.
2019
Academic Article
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Times cited: 15 -
Genetic codes optimized as a traveling salesman problem.
PloS one.
2019
Academic Article
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Times cited: 6 -
Analysis of a flagellar filament cap mutant reveals that HtrA serine protease degrades unfolded flagellin protein in the periplasm of Borrelia burgdorferi.
Molecular microbiology.
2019
Academic Article
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Times cited: 20 -
Primordial origin and diversification of plasmids in Lyme disease agent bacteria.
BMC genomics.
2019
Academic Article
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Times cited: 46 -
Genotyping and Quantifying Lyme Pathogen Strains by Deep Sequencing of the Outer Surface Protein C (ospC) Locus.
Journal of clinical microbiology.
2018
Academic Article
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Times cited: 19 -
BpWrapper: BioPerl-based sequence and tree utilities for rapid prototyping of bioinformatics pipelines.
BMC bioinformatics.
2018
Academic Article
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Times cited: 9 -
Bow-tie signaling in c-di-GMP: Machine learning in a simple biochemical network.
PLoS computational biology.
2017
Academic Article
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Times cited: 35 -
Plasmid diversity and phylogenetic consistency in the Lyme disease agent Borrelia burgdorferi.
BMC genomics.
2017
Academic Article
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Times cited: 73 -
Identification, validation, and targeting of the mutant p53-PARP-MCM chromatin axis in triple negative breast cancer.
NPJ breast cancer.
2017
Academic Article
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Times cited: 32 -
Lyme disease spirochaete Borrelia burgdorferi does not require thiamin.
Nature microbiology.
2016
Academic Article
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Times cited: 27 -
Phylogenetic Co-Occurrence of ExoR, ExoS, and ChvI, Components of the RSI Bacterial Invasion Switch, Suggests a Key Adaptive Mechanism Regulating the Transition between Free-Living and Host-Invading Phases in Rhizobiales.
PloS one.
2015
Academic Article
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Times cited: 21 - Erratum for Martin et al., Phylogenomic Identification of Regulatory Sequences in Bacteria: an Analysis of Statistical Power and an Application to Borrelia burgdorferi Sensu Lato. 2015 GET IT
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Phylogenomic identification of regulatory sequences in bacteria: an analysis of statistical power and an application to Borrelia burgdorferi sensu lato.
mBio.
2015
Academic Article
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Times cited: 2 -
BorreliaBase: a phylogeny-centered browser of Borrelia genomes.
BMC bioinformatics.
2014
Academic Article
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Times cited: 31 -
Evolutionary genomics of Borrelia burgdorferi sensu lato: findings, hypotheses, and the rise of hybrids.
Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases.
2014
Review
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Times cited: 30 -
Genetic exchange and plasmid transfers in Borrelia burgdorferi sensu stricto revealed by three-way genome comparisons and multilocus sequence typing.
Proceedings of the National Academy of Sciences of the United States of America.
2004
Academic Article
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Times cited: 118