GeneTrack--a genomic data processing and visualization framework. Academic Article uri icon

Overview

abstract

  • High-throughput 'ChIP-chip' and 'ChIP-seq' methodologies generate sufficiently large data sets that analysis poses significant informatics challenges, particularly for research groups with modest computational support. To address this challenge, we devised a software platform for storing, analyzing and visualizing high resolution genome-wide binding data. GeneTrack automates several steps of a typical data processing pipeline, including smoothing and peak detection, and facilitates dissemination of the results via the web. Our software is freely available via the Google Project Hosting environment at http://genetrack.googlecode.com

publication date

  • April 3, 2008

Research

keywords

  • Algorithms
  • Chromatin Immunoprecipitation
  • Chromosome Mapping
  • Genome, Human
  • Sequence Analysis, DNA
  • Software
  • User-Computer Interface

Identity

PubMed Central ID

  • PMC7058423

Scopus Document Identifier

  • 43349089437

Digital Object Identifier (DOI)

  • 10.1093/bioinformatics/btn119

PubMed ID

  • 18388141

Additional Document Info

volume

  • 24

issue

  • 10