Ensembl 2011. Academic Article uri icon

Overview

abstract

  • The Ensembl project (http://www.ensembl.org) seeks to enable genomic science by providing high quality, integrated annotation on chordate and selected eukaryotic genomes within a consistent and accessible infrastructure. All supported species include comprehensive, evidence-based gene annotations and a selected set of genomes includes additional data focused on variation, comparative, evolutionary, functional and regulatory annotation. The most advanced resources are provided for key species including human, mouse, rat and zebrafish reflecting the popularity and importance of these species in biomedical research. As of Ensembl release 59 (August 2010), 56 species are supported of which 5 have been added in the past year. Since our previous report, we have substantially improved the presentation and integration of both data of disease relevance and the regulatory state of different cell types.

authors

  • Flicek, Paul
  • Amode, M Ridwan
  • Barrell, Daniel
  • Beal, Kathryn
  • Brent, Simon
  • Chen, Yuan
  • Clapham, Peter
  • Coates, Guy
  • Fairley, Susan
  • Fitzgerald, Stephen
  • Gordon, Leo
  • Hendrix, Maurice
  • Hourlier, Thibaut
  • Johnson, Nathan
  • Kähäri, Andreas
  • Keefe, Damian
  • Keenan, Stephen
  • Kinsella, Rhoda
  • Kokocinski, Felix
  • Kulesha, Eugene
  • Larsson, Pontus
  • Longden, Ian
  • McLaren, William
  • Overduin, Bert
  • Pritchard, Bethan
  • Riat, Harpreet Singh
  • Rios, Daniel
  • Ritchie, Graham R S
  • Ruffier, Magali
  • Schuster, Michael
  • Sobral, Daniel
  • Spudich, Giulietta
  • Tang, Y Amy
  • Trevanion, Stephen
  • Vandrovcova, Jana
  • Vilella, Albert J
  • White, Simon
  • Wilder, Steven P
  • Zadissa, Amonida
  • Zamora, Jorge
  • Aken, Bronwen L
  • Birney, Ewan
  • Cunningham, Fiona
  • Dunham, Ian
  • Durbin, Richard
  • Fernández-Suarez, Xosé M
  • Herrero, Javier
  • Hubbard, Tim J P
  • Parker, Anne
  • Proctor, Glenn
  • Vogel, Jan
  • Searle, Stephen M J

publication date

  • November 2, 2010

Research

keywords

  • Databases, Genetic
  • Genomics

Identity

PubMed Central ID

  • PMC3013672

Scopus Document Identifier

  • 78651289449

Digital Object Identifier (DOI)

  • 10.1093/nar/gkq1064

PubMed ID

  • 21045057

Additional Document Info

volume

  • 39

issue

  • Database issue