Detection of renal cell carcinoma using plasma and urine cell-free DNA methylomes. Academic Article uri icon

Overview

abstract

  • Improving early cancer detection has the potential to substantially reduce cancer-related mortality. Cell-free methylated DNA immunoprecipitation and high-throughput sequencing (cfMeDIP-seq) is a highly sensitive assay capable of detecting early-stage tumors. We report accurate classification of patients across all stages of renal cell carcinoma (RCC) in plasma (area under the receiver operating characteristic (AUROC) curve of 0.99) and demonstrate the validity of this assay to identify patients with RCC using urine cell-free DNA (cfDNA; AUROC of 0.86).

authors

  • Nuzzo, Pier
  • Berchuck, Jacob E
  • Korthauer, Keegan
  • Spisak, Sandor
  • Nassar, Amin H
  • Abou Alaiwi, Sarah
  • Chakravarthy, Ankur
  • Shen, Shu Yi
  • Bakouny, Ziad
  • Boccardo, Francesco
  • Steinharter, John
  • Bouchard, Gabrielle
  • Curran, Catherine R
  • Pan, Wenting
  • Baca, Sylvan C
  • Seo, Ji-Heui
  • Lee, Gwo-Shu Mary
  • Michaelson, M Dror
  • Chang, Steven L
  • Waikar, Sushrut S
  • Sonpavde, Guru
  • Irizarry, Rafael A
  • Pomerantz, Mark
  • De Carvalho, Daniel D
  • Choueiri, Toni K
  • Freedman, Matthew L

publication date

  • June 22, 2020

Research

keywords

  • Carcinoma, Renal Cell
  • DNA Methylation
  • Early Detection of Cancer

Identity

PubMed Central ID

  • PMC8288043

Scopus Document Identifier

  • 85086778119

Digital Object Identifier (DOI)

  • 10.1038/s41591-020-0933-1

PubMed ID

  • 32572266

Additional Document Info

volume

  • 26

issue

  • 7