Whole-genome sequence and annotation of Penstemon davidsonii. Academic Article uri icon

Overview

abstract

  • Penstemon is the most speciose flowering plant genus endemic to North America. Penstemon species' diverse morphology and adaptation to various environments have made them a valuable model system for studying evolution. Here, we report the first full reference genome assembly and annotation for Penstemon davidsonii. Using PacBio long-read sequencing and Hi-C scaffolding technology, we constructed a de novo reference genome of 437,568,744 bases, with a contig N50 of 40 Mb and L50 of 5. The annotation includes 18,199 gene models, and both the genome and transcriptome assembly contain over 95% complete eudicot BUSCOs. This genome assembly will serve as a valuable reference for studying the evolutionary history and genetic diversity of the Penstemon genus.

publication date

  • March 6, 2024

Research

keywords

  • Penstemon

Identity

PubMed Central ID

  • PMC10917496

Scopus Document Identifier

  • 85184506036

Digital Object Identifier (DOI)

  • 10.1093/g3journal/jkad296

PubMed ID

  • 38155402

Additional Document Info

volume

  • 14

issue

  • 3