cProSite: A web based interactive platform for online proteomics, phosphoproteomics, and genomics data analysis. Academic Article uri icon

Overview

abstract

  • We developed cProSite, a website that provides online genomics, proteomics, and phosphoproteomics analysis for the data of The National Cancer Institute's Clinical Proteomic Tumor Analysis Consortium (CPTAC). This tool focuses on comparisons and correlations between different proteins and mRNAs of tumors and normal tissues. Our website is designed with biologists and clinicians in mind, with a user-friendly environment and fast search engine. The search results of cProSite can be used for clinical data validation and provide useful strategic information to identify drug targets at proteomic, phosphoproteomic, or genomic levels. The site is available at http://cprosite.ccr.cancer.gov.

authors

  • Wang, Dunrui
  • Qian, Xiaolan
  • Du, Nancy
  • Sanchez-Solana, Beatriz
  • Chen, Kailing
  • Kanigicherla, Madhu
  • Jenkins, Lisa M
  • Luo, Jason
  • Eng, Sarah
  • Park, Brian
  • Chen, Ben
  • Yao, Xiaozheng
  • Nguyen, Thuong
  • Tripathi, Brajendra K
  • Durkin, Marian E
  • Lowy, Douglas R

publication date

  • November 9, 2023

Identity

PubMed Central ID

  • PMC11210690

Digital Object Identifier (DOI)

  • 10.26502/jbb.2642-91280119

PubMed ID

  • 38938288

Additional Document Info

volume

  • 6

issue

  • 4