First Detection and Characterization of Smacovirus in the Human Vagina in Two Sequential Samples over a Twelve-Day Interval. Academic Article uri icon

Overview

abstract

  • BACKGROUND: Smacovirus is a CRESS-DNA virus identified almost exclusively in transient fecal samples from various vertebrate species. OBJECTIVE: We evaluated human vaginal samples for the presence and maintenance of Smacovirus. METHODS: Viral metagenomics analysis was performed on vaginal samples collected from 28 apparently healthy women in New York City, USA. Twenty-one of the women provided duplicate samples over a 12-21-day interval. RESULTS: Phylogenetic analysis identified two samples from the same individual, collected over a twelve-day interval, that were positive for the complete Smacovirus genome. All detected sequence contigs belonged to a single variant of CRESS-DNA. CONCLUSIONS: The continuous presence of Smacovirus in the human vagina over a twelve-day period was identified.

publication date

  • September 30, 2024

Research

keywords

  • Genome, Viral
  • Phylogeny
  • Vagina

Identity

PubMed Central ID

  • PMC11512292

Digital Object Identifier (DOI)

  • 10.3390/v16101545

PubMed ID

  • 39459879

Additional Document Info

volume

  • 16

issue

  • 10