selected publications
- Identifying Alzheimer's Disease Progression Subphenotypes via a Graph-based Framework using Electronic Health Records. 2025 GET IT
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Identifying progression subphenotypes of Alzheimer's disease from large-scale electronic health records with machine learning.
Journal of biomedical informatics.
2025
Academic Article
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Times cited: 1 -
Liver fibrosis associated with more severe motor deficits in early Parkinson's disease.
Clinical neurology and neurosurgery.
2025
Academic Article
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Times cited: 1 -
A network-based systems genetics framework identifies pathobiology and drug repurposing in Parkinson's disease.
NPJ Parkinson's disease.
2025
Academic Article
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Times cited: 5 -
Skin immune-mesenchymal interplay within tertiary lymphoid structures promotes autoimmune pathogenesis in hidradenitis suppurativa.
Immunity.
2024
Academic Article
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Times cited: 1 -
Single-microglia transcriptomic transition network-based prediction and real-world patient data validation identifies ketorolac as a repurposable drug for Alzheimer's disease.
Alzheimer's & Dementia.
2024
Academic Article
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Times cited: 3 - A network-based systems genetics framework identifies pathobiology and drug repurposing in Parkinson's disease. 2024 GET IT
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Identification of Parkinson's disease PACE subtypes and repurposing treatments through integrative analyses of multimodal data.
NPJ digital medicine.
2024
Academic Article
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Times cited: 16 - Learning Phenotypic Associations for Parkinson's Disease with Longitudinal Clinical Records. AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science. 2024 Academic Article GET IT
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Repurposing non-pharmacological interventions for Alzheimer's disease through link prediction on biomedical literature.
Scientific reports.
2024
Academic Article
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Times cited: 12 -
Chronic stress increases metastasis via neutrophil-mediated changes to the microenvironment.
Cancer cell.
2024
Academic Article
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Times cited: 129 -
Patterns of Social Determinants of Health and Child Mental Health, Cognition, and Physical Health.
JAMA pediatrics.
2023
Academic Article
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Times cited: 51 -
Protocol to implement a computational pipeline for biomedical discovery based on a biomedical knowledge graph.
STAR protocols.
2023
Academic Article
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Times cited: 1 - From Answers to Insights: Unveiling the Strengths and Limitations of ChatGPT and Biomedical Knowledge Graphs. 2023 GET IT
- From Answers to Insights: Unveiling the Strengths and Limitations of ChatGPT and Biomedical Knowledge Graphs. 2023 GET IT
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Using Machine Learning to Predict Antidepressant Treatment Outcome From Electronic Health Records.
Psychiatric research and clinical practice.
2023
Academic Article
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Times cited: 8 -
Biomedical discovery through the integrative biomedical knowledge hub (iBKH).
iScience.
2023
Academic Article
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Times cited: 18 -
Reactivation of Epstein-Barr Virus from Latency Involves Increased RNA Polymerase Activity at CTCF Binding Sites on the Viral Genome.
Journal of virology.
2023
Academic Article
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Times cited: 7 -
Application of Deep Learning on Single-cell RNA Sequencing Data Analysis: A Review.
Genomics, proteomics & bioinformatics.
2022
Review
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Times cited: 60 -
Prognostic and immunological significance of calcium-related gene signatures in renal clear cell carcinoma.
Frontiers in pharmacology.
2022
Academic Article
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Times cited: 1 -
Sepsis subphenotyping based on organ dysfunction trajectory.
Critical care (London, England).
2022
Academic Article
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Times cited: 53 -
Improving suicide risk prediction via targeted data fusion: proof of concept using medical claims data.
Journal of the American Medical Informatics Association : JAMIA.
2022
Academic Article
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Times cited: 15 -
Evaluation of Albumin Kinetics in Critically Ill Patients With Coronavirus Disease 2019 Compared to Those With Sepsis-Induced Acute Respiratory Distress Syndrome.
Critical care explorations.
2021
Academic Article
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Times cited: 10 -
Artificial intelligence for COVID-19: battling the pandemic with computational intelligence.
Intelligent medicine.
2021
Review
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Times cited: 25 -
Comprehensive subtyping of Parkinson's disease patients with similarity fusion: a case study with BioFIND data.
NPJ Parkinson's disease.
2021
Academic Article
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Times cited: 9 -
Identifying organ dysfunction trajectory-based subphenotypes in critically ill patients with COVID-19.
Scientific reports.
2021
Academic Article
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Times cited: 20 -
Clinical subphenotypes in COVID-19: derivation, validation, prediction, temporal patterns, and interaction with social determinants of health.
NPJ digital medicine.
2021
Academic Article
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Times cited: 22 -
Recent advances in biomedical literature mining.
Briefings in bioinformatics.
2021
Review
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Times cited: 84 -
Machine learning for suicide risk prediction in children and adolescents with electronic health records.
Translational psychiatry.
2020
Academic Article
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Times cited: 115 -
Federated Learning for Healthcare Informatics.
Journal of healthcare informatics research.
2020
Academic Article
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Times cited: 1018 -
Mining genetic and transcriptomic data using machine learning approaches in Parkinson's disease.
NPJ Parkinson's disease.
2020
Review
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Times cited: 37 -
Knowledge-driven drug repurposing using a comprehensive drug knowledge graph.
Health informatics journal.
2020
Academic Article
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Times cited: 11 -
Deep learning in mental health outcome research: a scoping review.
Translational psychiatry.
2020
Academic Article
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Times cited: 263 -
Network embedding in biomedical data science.
Briefings in bioinformatics.
2020
Academic Article
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Times cited: 137