selected publications
- The genetics of fruit skin separation in date palm. BMC plant biology. 2024 Academic Article GET IT
- A roadmap to the molecular human linking multiomics with population traits and diabetes subtypes. Nature communications. 2024 Academic Article GET IT
- The E3 ubiquitin-protein ligase UHRF1 promotes adipogenesis and limits fibrosis by suppressing GPNMB-mediated TGF-β signaling. Scientific reports. 2024 Academic Article GET IT
- Genome-wide association of dry (Tamar) date palm fruit color. The plant genome. 2023 Academic Article GET IT
- Identifying novel interactions of the colon-cancer related APC protein with Wnt-pathway nuclear transcription factors. Cancer cell international. 2022 Academic Article GET IT
- DNA methylation predicts the outcome of COVID-19 patients with acute respiratory distress syndrome. Journal of translational medicine. 2022 Academic Article GET IT
- Application of human RNase P normalization for the realistic estimation of SARS-CoV-2 viral load in wastewater: A perspective from Qatar wastewater surveillance. Environmental technology & innovation. 2022 Academic Article GET IT
- Discovery of new therapeutic targets in ovarian cancer through identifying significantly non-mutated genes. Journal of translational medicine. 2022 Academic Article GET IT
- Novel protein contact points among TP53 and minichromosome maintenance complex proteins 2, 3, and 5. Cancer medicine. 2022 Academic Article GET IT
- The QChip1 knowledgebase and microarray for precision medicine in Qatar. NPJ genomic medicine. 2022 Academic Article GET IT
- Introduction and expansion of the SARS-CoV-2 B.1.1.7 variant and reinfections in Qatar: A nationally representative cohort study. PLoS medicine. 2021 Academic Article GET IT
- Scaling-up a fragment-based protein-protein interaction method using a human reference interaction set. Proteins. 2021 Academic Article GET IT
- One Year of SARS-CoV-2: Genomic Characterization of COVID-19 Outbreak in Qatar. Frontiers in cellular and infection microbiology. 2021 Academic Article GET IT
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mRNA-1273 COVID-19 vaccine effectiveness against the B.1.1.7 and B.1.351 variants and severe COVID-19 disease in Qatar.
Nature medicine.
2021
Academic Article
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Times cited: 6 - Minor Intron Splicing from Basic Science to Disease. International journal of molecular sciences. 2021 Information Resource GET IT
- Pfizer-BioNTech mRNA BNT162b2 Covid-19 vaccine protection against variants of concern after one versus two doses. Journal of travel medicine. 2021 Academic Article GET IT
- SARS-CoV-2 antibody-positivity protects against reinfection for at least seven months with 95% efficacy. EClinicalMedicine. 2021 Academic Article GET IT
- Evidence of Recombination Suppression Blocks on the Y Chromosome of Date Palm (Phoenix dactylifera). Frontiers in plant science. 2021 Academic Article GET IT
- Deep sequencing of DNA from urine of kidney allograft recipients to estimate donor/recipient-specific DNA fractions. PloS one. 2021 Academic Article GET IT
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Regulation of Circular RNA CircNFATC3 in Cancer Cells Alters Proliferation, Migration, and Oxidative Phosphorylation.
Frontiers in cell and developmental biology.
2021
Academic Article
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Times cited: 19 -
COVID-19 (SARS-CoV-2) outbreak monitoring using wastewater-based epidemiology in Qatar.
The Science of the total environment.
2021
Academic Article
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Times cited: 94 - Assessment of the risk of SARS-CoV-2 reinfection in an intense re-exposure setting. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America. 2020 Academic Article GET IT
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Identification of genetic variants controlling RNA editing and their effect on RNA structure stabilization.
European journal of human genetics : EJHG.
2020
Academic Article
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Times cited: 5 -
Long non-coding RNA expression in non-obese women with polycystic ovary syndrome and weight-matched controls.
Reproductive biomedicine online.
2020
Academic Article
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Times cited: 1 -
Genome Diversity and the Origin of the Arabian Horse.
Scientific reports.
2020
Academic Article
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Times cited: 57 -
Deletion of beta-fructofuranosidase (invertase) genes is associated with sucrose content in Date Palm fruit.
Plant direct.
2020
Academic Article
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Times cited: 11 -
Epigenetics meets proteomics in an epigenome-wide association study with circulating blood plasma protein traits.
Nature communications.
2020
Academic Article
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Times cited: 43 -
Point of Care Exome Sequencing Reveals Allelic and Phenotypic Heterogeneity Underlying Mendelian disease in Qatar.
Human molecular genetics.
2019
Academic Article
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Times cited: 2 -
Alterations in long noncoding RNAs in women with and without polycystic ovarian syndrome.
Clinical endocrinology.
2019
Academic Article
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Times cited: 9 -
Identification of human genetic variants controlling circular RNA expression.
RNA (New York, N.Y.).
2019
Academic Article
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Times cited: 20 -
Cell Type-Specific TGF-β Mediated EMT in 3D and 2D Models and Its Reversal by TGF-β Receptor Kinase Inhibitor in Ovarian Cancer Cell Lines.
International journal of molecular sciences.
2019
Academic Article
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Times cited: 23 -
Novel subpopulations in date palm (Phoenix dactylifera) identified by population-wide organellar genome sequencing.
BMC genomics.
2019
Academic Article
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Times cited: 19 -
Silencing of ANKRD12 circRNA induces molecular and functional changes associated with invasive phenotypes.
BMC cancer.
2019
Academic Article
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Times cited: 35 -
High-resolution protein-protein interaction mapping using all-versus-all sequencing (AVA-Seq).
The Journal of biological chemistry.
2019
Academic Article
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Times cited: 6 -
Genotyping-by-sequencing identifies date palm clone preference in agronomics of the State of Qatar.
PloS one.
2018
Academic Article
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Times cited: 9 -
Genus-wide sequencing supports a two-locus model for sex-determination in Phoenix.
Nature communications.
2018
Academic Article
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Times cited: 82 -
Exome sequencing-based identification of novel type 2 diabetes risk allele loci in the Qatari population.
PloS one.
2018
Academic Article
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Times cited: 6 -
Point-of-care whole-exome sequencing of idiopathic male infertility.
Genetics in medicine : official journal of the American College of Medical Genetics.
2018
Academic Article
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Times cited: 35 -
A comprehensive metabolomic data set of date palm fruit.
Data in brief.
2018
Academic Article
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Times cited: 16 -
Deep molecular phenotypes link complex disorders and physiological insult to CpG methylation.
Human molecular genetics.
2018
Academic Article
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Times cited: 33 -
Whole-exome sequencing identifies common and rare variant metabolic QTLs in a Middle Eastern population.
Nature communications.
2018
Academic Article
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Times cited: 50 -
Connecting genetic risk to disease end points through the human blood plasma proteome.
Nature communications.
2017
Academic Article
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Times cited: 434 -
Mutation in noncoding RNA RNU12 causes early onset cerebellar ataxia.
Annals of neurology.
2017
Academic Article
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Times cited: 35 -
Correction: Type 2 Diabetes Risk Allele Loci in the Qatari Population.
2016
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Times cited: 1 -
Type 2 Diabetes Risk Allele Loci in the Qatari Population.
PloS one.
2016
Academic Article
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Times cited: 23 -
The Qatar genome: a population-specific tool for precision medicine in the Middle East.
Human genome variation.
2016
Academic Article
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Times cited: 86 -
Altered expression pattern of circular RNAs in primary and metastatic sites of epithelial ovarian carcinoma.
Oncotarget.
2016
Academic Article
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Times cited: 137 -
Preferential Allele Expression Analysis Identifies Shared Germline and Somatic Driver Genes in Advanced Ovarian Cancer.
PLoS genetics.
2016
Academic Article
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Times cited: 10 -
Indigenous Arabs are descendants of the earliest split from ancient Eurasian populations.
Genome research.
2016
Academic Article
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Times cited: 71 -
Metabolomics of dates (Phoenix dactylifera) reveals a highly dynamic ripening process accounting for major variation in fruit composition.
BMC plant biology.
2015
Academic Article
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Times cited: 39 -
Whole genome re-sequencing of date palms yields insights into diversification of a fruit tree crop.
Nature communications.
2015
Academic Article
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Times cited: 135 -
Copy number variations in the genome of the Qatari population.
BMC genomics.
2015
Academic Article
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Times cited: 9 -
A Genome-Wide Survey of Date Palm Cultivars Supports Two Major Subpopulations in Phoenix dactylifera.
G3 (Bethesda, Md.).
2015
Academic Article
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Times cited: 46 - K-core decomposition of a protein domain co-occurrence network reveals lower cancer mutation rates for interior cores. Journal of clinical bioinformatics. 2015 Academic Article GET IT
- Metabolomics of Ramadan fasting: an opportunity for the controlled study of physiological responses to food intake. Journal of translational medicine. 2014 Academic Article GET IT
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Where cancer genomics should go next: a clinician's perspective.
Human molecular genetics.
2014
Information Resource
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Times cited: 12 -
A first genetic map of date palm (Phoenix dactylifera) reveals long-range genome structure conservation in the palms.
BMC genomics.
2014
Academic Article
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Times cited: 75 -
Whole genome sequencing identifies a novel occludin mutation in microcephaly with band-like calcification and polymicrogyria that extends the phenotypic spectrum.
American journal of medical genetics. Part A.
2014
Article
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Times cited: 9 -
Mesenchymal cell interaction with ovarian cancer cells induces a background dependent pro-metastatic transcriptomic profile.
Journal of translational medicine.
2014
Academic Article
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Times cited: 26 -
Longitudinal study of recurrent metastatic melanoma cell lines underscores the individuality of cancer biology.
The Journal of investigative dermatology.
2013
Academic Article
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Times cited: 3 -
Exome sequencing identifies potential risk variants for Mendelian disorders at high prevalence in Qatar.
Human mutation.
2013
Academic Article
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Times cited: 43 -
Prevalence of the apolipoprotein E Arg145Cys dyslipidemia at-risk polymorphism in African-derived populations.
The American journal of cardiology.
2013
Academic Article
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Times cited: 14 -
TNRC9 downregulates BRCA1 expression and promotes breast cancer aggressiveness.
Cancer research.
2013
Academic Article
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Times cited: 27 -
Exome sequencing of only seven Qataris identifies potentially deleterious variants in the Qatari population.
PloS one.
2012
Academic Article
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Times cited: 16 - High-prevalence and broad spectrum of Cell Adhesion and Extracellular Matrix gene pathway mutations in epithelial ovarian cancer. Journal of clinical bioinformatics. 2012 Academic Article GET IT
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Gene expression analysis of matched ovarian primary tumors and peritoneal metastasis.
Journal of translational medicine.
2012
Academic Article
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Times cited: 20 -
Comprehensive characterization of mesenchymal stem cells from human placenta and fetal membrane and their response to osteoactivin stimulation.
Stem cells international.
2012
Academic Article
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Times cited: 68 -
Mesenchymal cell interaction with ovarian cancer cells triggers pro-metastatic properties.
PloS one.
2012
Academic Article
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Times cited: 43 -
DNA-based assays to distinguish date palm (Arecaceae) gender.
American journal of botany.
2011
Academic Article
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Times cited: 25 -
Copy number variation analysis of matched ovarian primary tumors and peritoneal metastasis.
PloS one.
2011
Academic Article
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Times cited: 43 -
De novo genome sequencing and comparative genomics of date palm (Phoenix dactylifera).
Nature biotechnology.
2011
Academic Article
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Times cited: 257 - New microsatellite markers for assessment of genetic diversity in date palm (Phoenix dactylifera L.). 3 Biotech. 2011 Academic Article GET IT
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Tumor associated mesenchymal stem cells protects ovarian cancer cells from hyperthermia through CXCL12.
International journal of cancer.
2011
Academic Article
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Times cited: 79 -
ALLPATHS 2: small genomes assembled accurately and with high continuity from short paired reads.
Genome biology.
2009
Academic Article
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Times cited: 141 -
Sequence and structural variation in a human genome uncovered by short-read, massively parallel ligation sequencing using two-base encoding.
Genome research.
2009
Academic Article
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Times cited: 417 -
Rapid whole-genome mutational profiling using next-generation sequencing technologies.
Genome research.
2008
Academic Article
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Times cited: 226 -
A high-resolution, nucleosome position map of C. elegans reveals a lack of universal sequence-dictated positioning.
Genome research.
2008
Academic Article
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Times cited: 480 -
The complete genome sequence and analysis of the epsilonproteobacterium Arcobacter butzleri.
PloS one.
2007
Academic Article
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Times cited: 191 -
Sequencing genomes from single cells by polymerase cloning.
Nature biotechnology.
2006
Academic Article
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Times cited: 298 - The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). Genome research. 2004 Academic Article GET IT
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Comparison of the genome of the oral pathogen Treponema denticola with other spirochete genomes.
Proceedings of the National Academy of Sciences of the United States of America.
2004
Academic Article
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Times cited: 224 -
Protein interaction mapping on a functional shotgun sequence of Rickettsia sibirica.
Nucleic acids research.
2004
Academic Article
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Times cited: 35 -
Radiation hybrid map, physical map, and low-pass genomic sequence of the canine prcd region on CFA9 and comparative mapping with the syntenic region on human chromosome 17.
Genomics.
2003
Academic Article
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Times cited: 15 -
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.
Proceedings of the National Academy of Sciences of the United States of America.
2002
Academic Article
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Times cited: 1598 -
The genome sequence of the malaria mosquito Anopheles gambiae.
Science (New York, N.Y.).
2002
Academic Article
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Times cited: 1523 -
The Brucella suis genome reveals fundamental similarities between animal and plant pathogens and symbionts.
Proceedings of the National Academy of Sciences of the United States of America.
2002
Academic Article
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Times cited: 400 -
A physical map of the mouse genome.
Nature.
2002
Academic Article
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Times cited: 251 -
Mouse BAC ends quality assessment and sequence analyses.
Genome research.
2001
Academic Article
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Times cited: 48 -
Abundant protein domains occur in proportion to proteome size.
Genome biology.
2001
Academic Article
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Times cited: 4 -
Optimized growth conditions for direct amplification of cDNA clone inserts from culture.
BioTechniques.
2001
Academic Article
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Times cited: 4 -
Degradation of persistent RNA in RNase-containing, high-throughput alkaline lysis DNA preparations.
BioTechniques.
2000
Academic Article
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Times cited: 1 -
Human BAC ends quality assessment and sequence analyses.
Genomics.
2000
Academic Article
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Times cited: 33 -
Evidence for lateral gene transfer between Archaea and bacteria from genome sequence of Thermotoga maritima.
Nature.
1999
Academic Article
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Times cited: 1162 -
Transcriptional regulation of the proton-translocating ATPase (atpIBEFHAGDC) operon of Escherichia coli: control by cell growth rate.
Journal of bacteriology.
1996
Academic Article
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Times cited: 64