Kim, Gene

Publications

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selected publications

Fréchet radiomic distance (FRD): A versatile metric for comparing medical imaging datasets. Medical image analysis. 2026 Academic Article GET IT
Tumor-Responsive Fluorogenic Spray for Image-Guided Cytoreduction of Disseminated Ovarian Tumors. Bioconjugate chemistry. 2025 Academic Article GET IT
A Phase 2 Exploratory Trial Evaluating Computed Tomography-Based Midtreatment Nodal Response to Select for De-escalated Chemoradiation Therapy in the Definitive Management of p16+ Oropharyngeal Cancer. International journal of radiation oncology, biology, physics. 2025 Academic Article GET IT
Considerations and recommendations from the ISMRM diffusion study group for preclinical diffusion MRI: Part 2-Ex vivo imaging: Added value and acquisition. Magnetic resonance in medicine. 2025 Information Resource GET IT
Times cited: 3
Dynamic MRI with Locally Low-Rank Subspace Constraint: Towards 1-Second Temporal Resolution Aided by Deep Learning. Research square. 2025 Article GET IT
Considerations and recommendations from the ISMRM Diffusion Study Group for preclinical diffusion MRI: Part 3-Ex vivo imaging: Data processing, comparisons with microscopy, and tractography. Magnetic resonance in medicine. 2025 Information Resource GET IT
Times cited: 4
Considerations and recommendations from the ISMRM diffusion study group for preclinical diffusion MRI: Part 1: In vivo small-animal imaging. Magnetic resonance in medicine. 2025 Information Resource GET IT
Times cited: 8
FastMRI Breast: A Publicly Available Radial k-Space Dataset of Breast Dynamic Contrast-enhanced MRI. Radiology. Artificial intelligence. 2025 Academic Article GET IT
Times cited: 2
Estimation of fatty acid composition in mammary adipose tissue using deep neural network with unsupervised training. Magnetic resonance in medicine. 2024 Academic Article GET IT
Digital reference object toolkit of breast DCE MRI for quantitative evaluation of image reconstruction and analysis methods. Magnetic resonance in medicine. 2024 Academic Article GET IT
Times cited: 1
Feasibility of measuring blood-brain barrier permeability using ultra-short echo time radial magnetic resonance imaging. Journal of neuroimaging : official journal of the American Society of Neuroimaging. 2024 Academic Article GET IT
Times cited: 1
The ISMRM Open Science Initiative for Perfusion Imaging (OSIPI): Results from the OSIPI-Dynamic Contrast-Enhanced challenge. Magnetic resonance in medicine. 2023 Academic Article GET IT
Times cited: 11
Improving measurement of blood-brain barrier permeability with reduced scan time using deep-learning-derived capillary input function. NeuroImage. 2023 Academic Article GET IT
Times cited: 7
Incremental Utility of First-Pass Perfusion CMR for Prognostic Risk Stratification of Cancer-Associated Cardiac Masses. JACC. Cardiovascular imaging. 2023 Academic Article GET IT
Times cited: 7
Textural Features of Mouse Glioma Models Measured by Dynamic Contrast-Enhanced MR Images with 3D Isotropic Resolution. Tomography (Ann Arbor, Mich.). 2023 Academic Article GET IT
Times cited: 1
Simultaneous estimation of the cellular water exchange rate, intracellular volume fraction, and longitudinal relaxation rate in cancer cells. NMR in biomedicine. 2023 Academic Article GET IT
Evaluation of cellular water exchange in a mouse glioma model using dynamic contrast-enhanced MRI with two flip angles. Scientific reports. 2023 Academic Article GET IT
Times cited: 4
Rapid In Vitro Quantification of a Sensitized Gadolinium Chelate via Photoinduced Triplet Harvesting. ACS omega. 2023 Academic Article GET IT
Time-dependent diffusivity and kurtosis in phantoms and patients with head and neck cancer. Magnetic resonance in medicine. 2022 Academic Article GET IT
Times cited: 20
Estimation of Contrast Agent Concentration in DCE-MRI Using 2 Flip Angles. Investigative radiology. 2022 Academic Article GET IT
Times cited: 3
Assessing Tumour Haemodynamic Heterogeneity and Response to Choline Kinase Inhibition Using Clustered Dynamic Contrast Enhanced MRI Parameters in Rodent Models of Glioblastoma. Cancers. 2022 Academic Article GET IT
Times cited: 4
Estimation of the capillary level input function for dynamic contrast-enhanced MRI of the breast using a deep learning approach. Magnetic resonance in medicine. 2022 Academic Article GET IT
Times cited: 5
Quantitative Imaging of Body Fat Distribution in the Era of Deep Learning. Academic radiology. 2021 Editorial Article GET IT
Times cited: 4
Measurement of cellular-interstitial water exchange time in tumors based on diffusion-time-dependent diffusional kurtosis imaging. NMR in biomedicine. 2021 Academic Article GET IT
Times cited: 35
Bilateral gradient-echo spectroscopic imaging with correction of frequency variations for measurement of fatty acid composition in mammary adipose tissue. Magnetic resonance in medicine. 2021 Academic Article GET IT
Times cited: 4
An interpretable classifier for high-resolution breast cancer screening images utilizing weakly supervised localization. Medical image analysis. 2020 Academic Article GET IT
Times cited: 158
Assessment of metastatic lymph nodes in head and neck squamous cell carcinomas using simultaneous ¹⁸F-FDG-PET and MRI. Scientific reports. 2020 Academic Article GET IT
Times cited: 26
Evaluation of metronomic chemotherapy response using diffusion and dynamic contrast-enhanced MRI. PloS one. 2020 Academic Article GET IT
Times cited: 5
Prediction of distant metastases in patients with squamous cell carcinoma of head and neck using DWI and DCE-MRI. Head & neck. 2020 Academic Article GET IT
Times cited: 9
Assessment of tumor treatment response using active contrast encoding (ACE)-MRI: Comparison with conventional DCE-MRI. PloS one. 2020 Academic Article GET IT
Times cited: 6
Advances in Diffusion and Perfusion MRI for Quantitative Cancer Imaging. Current pathobiology reports. 2019 Academic Article GET IT
Times cited: 5
Globally-Aware Multiple Instance Classifier for Breast Cancer Screening. Machine learning in medical imaging. MLMI (Workshop). 2019 Academic Article GET IT
Times cited: 22
Deep Neural Networks Improve Radiologists' Performance in Breast Cancer Screening. IEEE transactions on medical imaging. 2019 Academic Article GET IT
Times cited: 540
Dynamic Contrast-Enhanced MRI Evaluation of Pathologic Complete Response in Human Epidermal Growth Factor Receptor 2 (HER2)-Positive Breast Cancer After HER2-Targeted Therapy. Academic radiology. 2019 Academic Article GET IT
Times cited: 19
Estimation of cellular-interstitial water exchange in dynamic contrast enhanced MRI using two flip angles. NMR in biomedicine. 2019 Academic Article GET IT
Times cited: 8
Diffusional kurtosis imaging for differentiation of additional suspicious lesions on preoperative breast MRI of patients with known breast cancer. Magnetic resonance imaging. 2019 Academic Article GET IT
Times cited: 18
Preliminary study: Breast cancers can be well seen on 3T breast MRI with a half-dose of gadobutrol. Clinical imaging. 2019 Academic Article GET IT
Times cited: 13
Imaging of Cardiovascular Thoracic Emergencies: Acute Aortic Syndrome and Pulmonary Embolism. Radiologic clinics of North America. 2019 Information Resource GET IT
Times cited: 11
Along-axon diameter variation and axonal orientation dispersion revealed with 3D electron microscopy: implications for quantifying brain white matter microstructure with histology and diffusion MRI. Brain structure & function. 2019 Academic Article GET IT
Times cited: 90
Preliminary analysis: Background parenchymal 18F-FDG uptake in breast cancer patients appears to correlate with background parenchymal enhancement and to vary by distance from the index cancer. European journal of radiology. 2018 Academic Article GET IT
Times cited: 6
Association among T2 signal intensity, necrosis, ADC and Ki-67 in estrogen receptor-positive and HER2-negative invasive ductal carcinoma. Magnetic resonance imaging. 2018 Academic Article GET IT
Times cited: 21
Rapid dynamic contrast-enhanced MRI for small animals at 7T using 3D ultra-short echo time and golden-angle radial sparse parallel MRI. Magnetic resonance in medicine. 2018 Academic Article GET IT
Times cited: 23
Accuracy and precision of quantitative DCE-MRI parameters: How should one estimate contrast concentration?. Magnetic resonance imaging. 2018 Academic Article GET IT
Times cited: 22
Quantifying myofiber integrity using diffusion MRI and random permeable barrier modeling in skeletal muscle growth and Duchenne muscular dystrophy model in mice. Magnetic resonance in medicine. 2018 Academic Article GET IT
Times cited: 25
Measurement of blood-brain barrier permeability using dynamic contrast-enhanced magnetic resonance imaging with reduced scan time. Magnetic resonance in medicine. 2018 Academic Article GET IT
Times cited: 14
Feasibility analysis of early temporal kinetics as a surrogate marker for breast tumor type, grade, and aggressiveness. Journal of magnetic resonance imaging : JMRI. 2017 Academic Article GET IT
Times cited: 14
Dynamic Contrast-Enhanced MRI-Derived Intracellular Water Lifetime (τ _i ): A Prognostic Marker for Patients with Head and Neck Squamous Cell Carcinomas. AJNR. American journal of neuroradiology. 2017 Academic Article GET IT
Times cited: 33
Comprehensive Dynamic Contrast-Enhanced 3D Magnetic Resonance Imaging of the Breast With Fat/Water Separation and High Spatiotemporal Resolution Using Radial Sampling, Compressed Sensing, and Parallel Imaging. Investigative radiology. 2017 Academic Article GET IT
Times cited: 13
Simultaneous measurement of T₁ /B₁ and pharmacokinetic model parameters using active contrast encoding (ACE)-MRI. NMR in biomedicine. 2017 Academic Article GET IT
Times cited: 9
Comparison of conventional DCE-MRI and a novel golden-angle radial multicoil compressed sensing method for the evaluation of breast lesion conspicuity. Journal of magnetic resonance imaging : JMRI. 2016 Academic Article GET IT
Times cited: 39
Voxelwise analysis of simultaneously acquired and spatially correlated ¹⁸ F-fluorodeoxyglucose (FDG)-PET and intravoxel incoherent motion metrics in breast cancer. Magnetic resonance in medicine. 2016 Academic Article GET IT
Times cited: 10
Separation of benign and malignant breast lesions using dynamic contrast enhanced MRI in a biopsy cohort. Journal of magnetic resonance imaging : JMRI. 2016 Academic Article GET IT
Times cited: 29
Assessment of Aggressiveness of Breast Cancer Using Simultaneous 18F-FDG-PET and DCE-MRI: Preliminary Observation. Clinical nuclear medicine. 2016 Academic Article GET IT
Times cited: 24
Pulsed and oscillating gradient MRI for assessment of cell size and extracellular space (POMACE) in mouse gliomas. NMR in biomedicine. 2016 Academic Article GET IT
Times cited: 103
Stimulated echo diffusion tensor imaging (STEAM-DTI) with varying diffusion times as a probe of breast tissue. Journal of magnetic resonance imaging : JMRI. 2016 Academic Article GET IT
Times cited: 38
Evaluation of Breast Lipid Composition in Patients with Benign Tissue and Cancer by Using Multiple Gradient-Echo MR Imaging. Radiology. 2016 Academic Article GET IT
Times cited: 32
Intravoxel incoherent motion diffusion-weighted MR imaging of breast cancer: association with histopathological features and subtypes. The British journal of radiology. 2016 Academic Article GET IT
Times cited: 58
Potential Role of PET/MRI for Imaging Metastatic Lymph Nodes in Head and Neck Cancer. AJR. American journal of roentgenology. 2016 Information Resource GET IT
Times cited: 32
Comparison of Whole-Body (18)F FDG PET/MR Imaging and Whole-Body (18)F FDG PET/CT in Terms of Lesion Detection and Radiation Dose in Patients with Breast Cancer. Radiology. 2016 Academic Article GET IT
Times cited: 119
In vivo quantification of demyelination and recovery using compartment-specific diffusion MRI metrics validated by electron microscopy. NeuroImage. 2016 Academic Article GET IT
Times cited: 159
Evaluation of a known breast cancer using an abbreviated breast MRI protocol: Correlation of imaging characteristics and pathology with lesion detection and conspicuity. European journal of radiology. 2016 Academic Article GET IT
Times cited: 126
Assessment of Background Parenchymal Enhancement and Lesion Kinetics in Breast MRI of BRCA 1/2 Mutation Carriers Compared to Matched Controls Using Quantitative Kinetic Analysis. Academic radiology. 2016 Academic Article GET IT
Times cited: 13
Evaluation of breast cancer using intravoxel incoherent motion (IVIM) histogram analysis: comparison with malignant status, histological subtype, and molecular prognostic factors. European radiology. 2015 Academic Article GET IT
Times cited: 148
Differentiating Tumor Progression from Pseudoprogression in Patients with Glioblastomas Using Diffusion Tensor Imaging and Dynamic Susceptibility Contrast MRI. AJNR. American journal of neuroradiology. 2015 Academic Article GET IT
Times cited: 148
Effect of T2* correction on contrast kinetic model analysis using a reference tissue arterial input function at 7 T. Magma (New York, N.Y.). 2015 Academic Article GET IT
Times cited: 11
Surface-to-volume ratio mapping of tumor microstructure using oscillating gradient diffusion weighted imaging. Magnetic resonance in medicine. 2015 Academic Article GET IT
Times cited: 58
Comparison of contrast enhancement and diffusion-weighted magnetic resonance imaging in healthy and cancerous breast tissue. European journal of radiology. 2015 Academic Article GET IT
Times cited: 15
Influence of temporal regularization and radial undersampling factor on compressed sensing reconstruction in dynamic contrast enhanced MRI of the breast. Journal of magnetic resonance imaging : JMRI. 2015 Academic Article GET IT
Times cited: 35
Comparison of fitting methods and b-value sampling strategies for intravoxel incoherent motion in breast cancer. Magnetic resonance in medicine. 2014 Academic Article GET IT
Times cited: 119
Simulation study of the effect of golden-angle KWIC with generalized kinetic model analysis on diagnostic accuracy for lesion discrimination. Magnetic resonance imaging. 2014 Academic Article GET IT
Times cited: 3
Altering the intestinal microbiota during a critical developmental window has lasting metabolic consequences. Cell. 2014 Academic Article GET IT
Times cited: 1607
Diagnostic utility of diffusion tensor imaging in differentiating glioblastomas from brain metastases. AJNR. American journal of neuroradiology. 2014 Academic Article GET IT
Times cited: 61
High-resolution magnetic resonance microscopy and diffusion tensor imaging to assess brain structural abnormalities in the murine mucopolysaccharidosis VII model. Journal of neuropathology and experimental neurology. 2014 Academic Article GET IT
Times cited: 11
Radiation injury to the normal brain measured by 3D-echo-planar spectroscopic imaging and diffusion tensor imaging: initial experience. Journal of neuroimaging : official journal of the American Society of Neuroimaging. 2013 Academic Article GET IT
Times cited: 36
Golden-angle radial sparse parallel MRI: combination of compressed sensing, parallel imaging, and golden-angle radial sampling for fast and flexible dynamic volumetric MRI. Magnetic resonance in medicine. 2013 Academic Article GET IT
Times cited: 626
Ductal carcinoma in situ of the breasts: review of MR imaging features. Radiographics : a review publication of the Radiological Society of North America, Inc. 2013 Information Resource GET IT
Times cited: 90
Uncertainty in MR tracer kinetic parameters and water exchange rates estimated from T1-weighted dynamic contrast enhanced MRI. Magnetic resonance in medicine. 2013 Academic Article GET IT
Times cited: 15
Evaluation of the kinetic properties of background parenchymal enhancement throughout the phases of the menstrual cycle. Radiology. 2013 Academic Article GET IT
Times cited: 42
High temporal resolution 3D gadolinium-enhanced dynamic MR imaging of renal tumors with pharmacokinetic modeling: preliminary observations. Journal of magnetic resonance imaging : JMRI. 2013 Academic Article GET IT
Times cited: 21
Comparison of 3-point Dixon imaging and fuzzy C-means clustering methods for breast density measurement. Journal of magnetic resonance imaging : JMRI. 2013 Academic Article GET IT
Times cited: 30
Pretreatment diffusion-weighted and dynamic contrast-enhanced MRI for prediction of local treatment response in squamous cell carcinomas of the head and neck. AJR. American journal of roentgenology. 2013 Academic Article GET IT
Times cited: 138
Differentiation of malignant and benign breast lesions using magnetization transfer imaging and dynamic contrast-enhanced MRI. Journal of magnetic resonance imaging : JMRI. 2012 Academic Article GET IT
Times cited: 18
Magnetic resonance imaging (MRI) of hormone-induced breast changes in young premenopausal women. Magnetic resonance imaging. 2012 Academic Article GET IT
Times cited: 30
Longitudinal in-vivo diffusion tensor imaging for assessing brain developmental changes in BALB/cJ mice, a model of reduced sociability relevant to autism. Brain research. 2012 Academic Article GET IT
Times cited: 30
A versatile flow phantom for intravoxel incoherent motion MRI. Magnetic resonance in medicine. 2011 Academic Article GET IT
Times cited: 52
Determination of grade and subtype of meningiomas by using histogram analysis of diffusion-tensor imaging metrics. Radiology. 2011 Academic Article GET IT
Times cited: 70
Interstitial fluid pressure correlates with intravoxel incoherent motion imaging metrics in a mouse mammary carcinoma model. NMR in biomedicine. 2011 Academic Article GET IT
Times cited: 43
Diffusion weighted imaging in predicting progression free survival in patients with squamous cell carcinomas of the head and neck treated with induction chemotherapy. Academic radiology. 2011 Academic Article GET IT
Times cited: 35
Association between sociability and diffusion tensor imaging in BALB/cJ mice. NMR in biomedicine. 2011 Academic Article GET IT
Times cited: 13
Prediction of disease-free survival in patients with squamous cell carcinomas of the head and neck using dynamic contrast-enhanced MR imaging. AJNR. American journal of neuroradiology. 2011 Academic Article GET IT
Times cited: 80
Intravoxel incoherent motion imaging of tumor microenvironment in locally advanced breast cancer. Magnetic resonance in medicine. 2011 Academic Article GET IT
Times cited: 205
Gadolinium-enhanced liver magnetic resonance imaging using a 2-point Dixon fat-water separation technique: impact upon image quality and lesion detection. Journal of computer assisted tomography. 2011 Academic Article GET IT
Times cited: 21
Effects of cardiac pulsation in diffusion tensor imaging of the rat brain. Journal of neuroscience methods. 2010 Academic Article GET IT
Times cited: 7
Early detection of radiation therapy response in non-Hodgkin's lymphoma xenografts by in vivo 1H magnetic resonance spectroscopy and imaging. NMR in biomedicine. 2010 Academic Article GET IT
Times cited: 41
Detection of lactate with a hadamard slice selected, selective multiple quantum coherence, chemical shift imaging sequence (HDMD-SelMQC-CSI) on a clinical MRI scanner: Application to tumors and muscle ischemia. Magnetic resonance in medicine. 2009 Academic Article GET IT
Times cited: 33
Prediction of response to chemoradiation therapy in squamous cell carcinomas of the head and neck using dynamic contrast-enhanced MR imaging. AJNR. American journal of neuroradiology. 2009 Academic Article GET IT
Times cited: 181
Diffusion-weighted imaging in head and neck cancers. Future oncology (London, England). 2009 Information Resource GET IT
Times cited: 90
Proton and phosphorous MR spectroscopy in squamous cell carcinomas of the head and neck. Academic radiology. 2009 Academic Article GET IT
Times cited: 20
Enhanced delineation of white matter structures of the fixed mouse brain using Gd-DTPA in microscopic MRI. NMR in biomedicine. 2009 Academic Article GET IT
Times cited: 26
Diffusion-weighted magnetic resonance imaging for predicting and detecting early response to chemoradiation therapy of squamous cell carcinomas of the head and neck. Clinical cancer research : an official journal of the American Association for Cancer Research. 2009 Academic Article GET IT
Times cited: 358
Does diffusion-tensor MR imaging provide accurate tracing of specific white matter tracts that correspond to actual anatomic and functional units in the central nervous system?. Radiology. 2008 Article GET IT
Times cited: 9
Differentiation between glioblastomas and solitary brain metastases using diffusion tensor imaging. NeuroImage. 2008 Academic Article GET IT
Times cited: 139
Three-dimensional mapping of lingual myoarchitecture by diffusion tensor MRI. NMR in biomedicine. 2008 Academic Article GET IT
Times cited: 4
Diffusion tensor MRI in rat models of invasive and well-demarcated brain tumors. NMR in biomedicine. 2008 Academic Article GET IT
Times cited: 36
Automatic correction of in-plane bulk motion artifacts in self-navigated radial MRI. Magnetic resonance imaging. 2008 Academic Article GET IT
Times cited: 9
Transcytolemmal water exchange in pharmacokinetic analysis of dynamic contrast-enhanced MRI data in squamous cell carcinoma of the head and neck. Journal of magnetic resonance imaging : JMRI. 2007 Academic Article GET IT
Times cited: 60
Dependence on diffusion time of apparent diffusion tensor of ex vivo calf tongue and heart. Magnetic resonance in medicine. 2005 Academic Article GET IT
Times cited: 78
Correlation between BOLD-fMRI and EEG signal changes in response to visual stimulus frequency in humans. Magnetic resonance in medicine. 2003 Academic Article GET IT
Times cited: 99

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Research

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Funding awarded

Development and Clinical Translation of RPBM for Quantitative Assessment of Myofascial Pain awarded by National Center for Complementary and Integrative Health/NIH/DHHS Principal Investigator 2024 - 2026

Does Bone morphogenic aspirate concentrate (BMAC) reduce symptoms and regenerate degenerative temporomandibular joints? awarded by Oral and Maxillofacial Surgery Foundation Co-Investigator 2026 - 2027
Fluid mechanics approach to tissue perfusion quantification in MRI awarded by National Institute of Biomedical Imaging & Bioengineering Co-Investigator 2023 - 2027

New PET/CT System for Human and Non-human Primate Imaging awarded by National Institutes of Health, Office of the Director Key Personnel 2023 - 2026

Harmonization of breast MRI data awarded by National Institute of Allergy & Infectious Diseases Principal Investigator Subaward 2022 - 2027

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Background

education and training

Ph.D., University of Southern California 2003
M.S., University of Southern California 2001
B.S., Korea Advanced Institute of Science and Technology (Korea) 1990

Contact

full name

Gene Kim

primary email

sgk4001@med.cornell.edu

VIVO Weill Cornell Medical College

Gene Kim Professor of Biomedical Engineering in Radiology

Publications

selected publications

Research

Funding awarded

Background

education and training

Contact

full name

primary email