PDZBase: a protein-protein interaction database for PDZ-domains. Academic Article uri icon

Overview

abstract

  • SUMMARY: PDZBase is a database that aims to contain all known PDZ-domain-mediated protein-protein interactions. Currently, PDZBase contains approximately 300 such interactions, which have been manually extracted from > 200 articles. The database can be queried through both sequence motif and keyword-based searches, and the sequences of interacting proteins can be visually inspected through alignments (for the comparison of several interactions), or as residue-based diagrams including schematic secondary structure information (for individual complexes).

publication date

  • October 28, 2004

Research

keywords

  • Database Management Systems
  • Databases, Protein
  • Information Storage and Retrieval
  • Membrane Proteins
  • Periodicals as Topic
  • Protein Interaction Mapping
  • User-Computer Interface

Identity

Scopus Document Identifier

  • 15944375458

PubMed ID

  • 15513994

Additional Document Info

volume

  • 21

issue

  • 6