B cell imprinting in children impairs antibodies to the haemagglutinin stalk. Academic Article uri icon

Overview

abstract

  • Immune imprinting1 or original antigenic sin2 is a phenomenon whereby the immune system preferentially recalls its initial response to a related, often evolving pathogen after subsequent exposure. Despite its important implications for vaccine development, the causes of imprinting remain unclear. Here, to understand the basis and impact of imprinting by influenza A viruses, we characterized the B cell responses of young children after consecutive first infections with divergent H1N1 and H3N2 strains of influenza. Children had a primary but otherwise similar B cell response to that of adults. Adult B cells commonly cross-reacted with past strains using more stereotyped and mutated immunoglobulin genes, indicating substantial homosubtypic imprinting. In children, after consecutive heterosubtypic primary infections, up to 6% of memory B cells are H1/H3 cross-reactive and bind to the highly conserved central stalk epitope-a lead target for broadly protective vaccine candidates. Over 90% of these B cells had a higher affinity for the imprinting H3N2 strain, resulting in reduced breadth and neutralization potency against H1N1 strains. Mechanistically, the imprinting H3 strains and affected H1 strains shared a residue change in the stalk epitope (D46N) that was central to the nearly universal shift in reactivity, despite differing by only a single atomic group. In conclusion, imprinting by influenza viruses can cause a deleterious shift of nearly the entire memory recall response against key, conserved epitopes.

authors

  • Sun, Jiayi
  • Jo, Gyunghee
  • Troxell, Chloe A
  • Fu, Yanbin
  • Hoezl, Robert
  • Lv, Huibin
  • Abozeid, Hassanein H
  • Teo, Qi Wen
  • Pholcharee, Tossapol
  • McGrath, Joshua
  • Changrob, Siriruk
  • Nelson, Sean
  • Yasuhara, Atsuhiro
  • Huang, Min
  • Zheng, Nai-Ying
  • Chervin, Jordan C
  • Li, Lei
  • Fernández-Quintero, Monica L
  • Loeffler, Johannes R
  • Rodriguez, Alesandra J
  • Huang, Jiachen
  • Swanson, Olivia M
  • Balmaseda, Angel
  • Kuan, Guillermina
  • Campredon, Lora
  • Kaitlynn Allen, E
  • Neumann, Gabriele
  • Wu, Nicholas C
  • Kawaoka, Yoshihiro
  • Krammer, Florian
  • Mejias, Asuncion
  • Ramilo, Octavio
  • Thomas, Paul G
  • Gordon, Aubree
  • Ward, Andrew B
  • Han, Julianna
  • Wilson, Patrick

publication date

  • March 11, 2026

Identity

Digital Object Identifier (DOI)

  • 10.1038/s41586-026-10248-6

PubMed ID

  • 41813896