Journal of clinical microbiology
Journal
Overview
publication venue for
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The Brief Case: Disseminated Mycobacterium haemophilum Infection in a Kidney Transplant Recipient.
2017
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Ruminococcus gnavus total hip arthroplasty infection in a 62-year-old man with ulcerative colitis.
2015
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Demonstration of persistence of Salmonella typhimurium in an AIDS patient by molecular methods.
1994
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Endocarditis associated with Comamonas acidovorans.
1990
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Serratia plymuthica sepsis associated with infection of central venous catheter.
1987
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Reply to Kidd et al., "Inconsistencies within the proposed framework for stabilizing fungal nomenclature risk further confusion".
2024
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A conceptual framework for nomenclatural stability and validity of medically important fungi: a proposed global consensus guideline for fungal name changes supported by ABP, ASM, CLSI, ECMM, ESCMID-EFISG, EUCAST-AFST, FDLC, IDSA, ISHAM, MMSA, and MSGERC.
2023
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Multicenter evaluation of the BIOFIRE Joint Infection Panel for the detection of bacteria, yeast, and AMR genes in synovial fluid samples..
61.
2023
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Comparison between Perianal Swab and Stool Specimens for Detecting Colonization with Extended-Spectrum Beta-Lactamase-Producing and Fluoroquinolone-Resistant Enterobacterales.
2022
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Partial ORF1ab Gene Target Failure with Omicron BA.2.12.1..
60.
2022
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Prevalence and Characterization of the Cefazolin Inoculum Effect in North American Methicillin-Susceptible Staphylococcus aureus Isolates.
2022
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Manual Reading of Sensititre Broth Microdilution System Panels Improves Accuracy of Susceptibility Reporting for Polymyxin Antibiotics..
59.
2021
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Clinical Evaluation of a Real-Time PCR Assay for Simultaneous Detection of Helicobacter pylori and Genotypic Markers of Clarithromycin Resistance Directly from Stool..
59.
2021
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Evaluating the Rapid Emergence of Daptomycin Resistance in Corynebacterium: a Multicenter Study..
59.
2021
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Clinical Performance of the Point-of-Care cobas Liat for Detection of SARS-CoV-2 in 20 Minutes: a Multicenter Study..
59.
2021
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Evaluation of a Combined Multilocus Sequence Typing and Whole-Genome Sequencing Two-Step Algorithm for Routine Typing of Clostridioides difficile..
59.
2021
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Evaluation of Surrogate Tests for the Presence of mecA-Mediated Methicillin Resistance in Staphylococcus capitis, Staphylococcus haemolyticus, Staphylococcus hominis, and Staphylococcus warneri..
59.
2020
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Bacteremia and Blood Culture Utilization during COVID-19 Surge in New York City..
58.
2020
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Clinical Performance of SARS-CoV-2 Molecular Tests..
58.
2020
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Comparison of Two High-Throughput Reverse Transcription-PCR Systems for the Detection of Severe Acute Respiratory Syndrome Coronavirus 2..
58.
2020
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Evaluation of NG-Test Carba 5 for Rapid Phenotypic Detection and Differentiation of Five Common Carbapenemase Families: Results of a Multicenter Clinical Evaluation..
58.
2020
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Human Infections Caused by Clonally Related African Clade (Clade III) Strains of Candida auris in the Greater Houston Region..
58.
2020
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Reduced In Vitro Susceptibility of Streptococcus pyogenes to β-Lactam Antibiotics Associated with Mutations in the pbp2x Gene Is Geographically Widespread..
58.
2020
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Blood-Modified Carbapenem Inactivation Method: a Phenotypic Method for Detecting Carbapenemase-Producing Enterobacteriaceae Directly from Positive Blood Culture Broths..
58.
2020
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Evaluation of Oxacillin and Cefoxitin Disk Diffusion and Microbroth Dilution Methods for Detecting mecA-Mediated β-Lactam Resistance in Contemporary Staphylococcus epidermidis Isolates..
57.
2019
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Performance of Five Commercial Identification Platforms for Identification of Staphylococcus delphini..
57.
2019
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EDTA-Modified Carbapenem Inactivation Method: a Phenotypic Method for Detecting Metallo-β-Lactamase-Producing Enterobacteriaceae..
57.
2019
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Improved Performance of a Rapid Immunochromatographic Assay for Detection of PBP2a in Non-Staphylococcus aureus Staphylococcal Species..
57.
2019
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Using Machine Learning To Predict Antimicrobial MICs and Associated Genomic Features for Nontyphoidal Salmonella..
57.
2019
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Identification and Characterization of Clostridium difficile Sequence Type 37 Genotype by Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry..
56.
2018
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Development of Envelope Protein Antigens To Serologically Differentiate Zika Virus Infection from Dengue Virus Infection..
56.
2018
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Evaluation of Oxacillin and Cefoxitin Disk Diffusion and MIC Breakpoints Established by the Clinical and Laboratory Standards Institute for Detection of mecA-Mediated Oxacillin Resistance in Staphylococcus schleiferi..
56.
2018
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Closing the Brief Case: Disseminated Mycobacterium haemophilum Infection in a Kidney Transplant Recipient..
56.
2017
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Multicenter Evaluation of the Modified Carbapenem Inactivation Method and the Carba NP for Detection of Carbapenemase-Producing Pseudomonas aeruginosa and Acinetobacter baumannii..
56.
2017
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Multiplex Reverse Transcription-PCR for Simultaneous Surveillance of Influenza A and B Viruses..
55.
2017
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Closing the Brief Case: Too Beta To Be a "B"..
55.
2017
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Multicenter Performance Assessment of Carba NP Test..
55.
2017
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Modified Carbapenem Inactivation Method for Phenotypic Detection of Carbapenemase Production among Enterobacteriaceae..
55.
2017
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Evaluation of Pyrrolidonyl Arylamidase Activity in Staphylococcus delphini..
55.
2016
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Impact of Early Detection of Respiratory Viruses by Multiplex PCR Assay on Clinical Outcomes in Adult Patients..
54.
2016
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In Vitro Antimicrobial Susceptibility of Staphylococcus pseudintermedius Isolates of Human and Animal Origin..
54.
2016
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Multiplex Antibody Detection for Noninvasive Genus-Level Diagnosis of Prosthetic Joint Infection..
54.
2016
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Evaluation of the FilmArray Blood Culture Identification Panel: Results of a Multicenter Controlled Trial..
54.
2016
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Comparison of Multilocus Sequence Typing and the Xpert C. difficile/Epi Assay for Identification of Clostridium difficile 027/NAP1/BI..
54.
2015
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Evaluation of an Immunochromatographic Assay for Rapid Detection of Penicillin-Binding Protein 2a in Human and Animal Staphylococcus intermedius Group, Staphylococcus lugdunensis, and Staphylococcus schleiferi Clinical Isolates..
54.
2015
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Evaluation of Oxacillin and Cefoxitin Disk and MIC Breakpoints for Prediction of Methicillin Resistance in Human and Veterinary Isolates of Staphylococcus intermedius Group..
54.
2015
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Evaluation of Remel Spectra CRE Agar for Detection of Carbapenem-Resistant Bacteria from Rectal Swabs Obtained from Residents of a Long-Term-Care Facility..
53.
2015
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Molecular Types of Methicillin-Resistant Staphylococcus aureus and Methicillin-Sensitive S. aureus Strains Causing Skin and Soft Tissue Infections and Nasal Colonization, Identified in Community Health Centers in New York City..
53.
2015
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Reducing Unnecessary and Duplicate Ordering for Ovum and Parasite Examinations and Clostridium difficile PCR in Immunocompromised Patients by Using an Alert at the Time of Request in the Order Management System..
53.
2015
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Assessment of Reproducibility of Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry for Bacterial and Yeast Identification..
53.
2015
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Bacteremia caused by Arcobacter butzleri in an immunocompromised host..
53.
2015
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Monitoring of cytomegalovirus viral loads by two molecular assays in whole-blood and plasma samples from hematopoietic stem cell transplant recipients..
53.
2015
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High-throughput mycobacterial interspersed repetitive-unit-variable-number tandem-repeat genotyping for Mycobacterium tuberculosis epidemiological studies..
53.
2014
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Clinical laboratory response to a mock outbreak of invasive bacterial infections: a preparedness study..
52.
2014
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Analysis of culture-dependent versus culture-independent techniques for identification of bacteria in clinically obtained bronchoalveolar lavage fluid..
52.
2014
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Real-time cellular analysis coupled with a specimen enrichment accurately detects and quantifies Clostridium difficile toxins in stool..
52.
2014
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Economic evaluation of laboratory testing strategies for hospital-associated Clostridium difficile infection..
52.
2013
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Multicenter evaluation of the Vitek MS matrix-assisted laser desorption ionization-time of flight mass spectrometry system for identification of Gram-positive aerobic bacteria..
51.
2013
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Multicenter study evaluating the Vitek MS system for identification of medically important yeasts..
51.
2013
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Use of Luminex MagPlex magnetic microspheres for high-throughput spoligotyping of Mycobacterium tuberculosis isolates in Port-au-Prince, Haiti..
51.
2013
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A genomic day in the life of a clinical microbiology laboratory..
51.
2013
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A real-time PCR assay for rapid detection and quantification of Exserohilum rostratum, a causative pathogen of fungal meningitis associated with injection of contaminated methylprednisolone..
51.
2013
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Differences and similarities between culture-confirmed human granulocytic anaplasmosis and early lyme disease..
51.
2013
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Genetic analysis of glycopeptide-resistant Staphylococcus epidermidis strains from bone and joint infections..
51.
2012
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Development and evaluation of a novel, semiautomated Clostridium difficile typing platform..
51.
2012
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Comparative whole-genome mapping to determine Staphylococcus aureus genome size, virulence motifs, and clonality..
50.
2012
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Sustained reduction of microbial burden on common hospital surfaces through introduction of copper..
50.
2012
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Survival of methicillin-resistant Staphylococcus aureus and vancomycin-resistant Enterococcus spp. for an extended period of transport..
50.
2012
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Comparison of the Luminex xTAG RVP Fast assay and the Idaho Technology FilmArray RP assay for detection of respiratory viruses in pediatric patients at a cancer hospital..
50.
2012
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Strategy for rapid identification and antibiotic susceptibility testing of gram-negative bacteria directly recovered from positive blood cultures using the Bruker MALDI Biotyper and the BD Phoenix system..
50.
2012
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φ(2)GFP10, a high-intensity fluorophage, enables detection and rapid drug susceptibility testing of Mycobacterium tuberculosis directly from sputum samples..
50.
2012
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Clinical and laboratory characteristics of Clostridium difficile infection in patients with discordant diagnostic test results..
50.
2012
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Galactomannan antigenemia after infusion of gluconate-containing Plasma-Lyte..
49.
2011
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Molecular detection and species-specific identification of medically important Aspergillus species by real-time PCR in experimental invasive pulmonary aspergillosis..
49.
2011
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Molecular epidemiology of carbapenem-nonsusceptible Acinetobacter baumannii in the United States..
49.
2011
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Comparison of performance of the novel chromogenic spectra VRE agar to that of bile esculin azide and Campylobacter agars for detection of vancomycin-resistant enterococci in fecal samples..
49.
2011
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Frequency of panton-valentine leukocidin-producing methicillin-sensitive Staphylococcus strains in patients with complicated skin and soft tissue infection in bronx, new york..
49.
2011
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Comparison of polymyxin B, tigecycline, cefepime, and meropenem MICs for KPC-producing Klebsiella pneumoniae by broth microdilution, Vitek 2, and Etest..
49.
2011
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Evaluation of the 3M rapid detection test for respiratory syncytial virus (RSV) in children during the early stages of the 2009 RSV season..
49.
2010
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Evaluation of the Cepheid Xpert Clostridium difficile Epi assay for diagnosis of Clostridium difficile infection and typing of the NAP1 strain at a cancer hospital..
48.
2010
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Susceptibility profiles, molecular epidemiology, and detection of KPC-producing Escherichia coli isolates from the New York City vicinity..
48.
2010
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Unique hepatitis B virus subgenotype in a primitive tribal community in eastern India..
48.
2010
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Comparison of meropenem MICs and susceptibilities for carbapenemase-producing Klebsiella pneumoniae isolates by various testing methods..
48.
2010
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Comparison of inhibitory mold agar to Sabouraud dextrose agar as a primary medium for isolation of fungi..
48.
2010
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Decreased susceptibility to teicoplanin and vancomycin in coagulase-negative Staphylococci isolated from orthopedic-device-associated infections..
48.
2010
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Assessing human immunodeficiency virus type 1 tropism: Comparison of assays using replication-competent virus versus plasma-derived pseudotyped virions..
47.
2009
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Use of spoligotyping and large sequence polymorphisms to study the population structure of the Mycobacterium tuberculosis complex in a cohort study of consecutive smear-positive tuberculosis cases in The Gambia..
47.
2009
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Use of sloppy molecular beacon probes for identification of mycobacterial species..
47.
2009
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Detection of a molecular biomarker for zygomycetes by quantitative PCR assays of plasma, bronchoalveolar lavage, and lung tissue in a rabbit model of experimental pulmonary zygomycosis..
46.
2008
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Detection and serotyping of dengue virus in serum samples by multiplex reverse transcriptase PCR-ligase detection reaction assay..
46.
2008
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Development of multiplex PCR-ligase detection reaction assay for detection of West Nile virus..
46.
2008
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Automated and manual methods of DNA extraction for Aspergillus fumigatus and Rhizopus oryzae analyzed by quantitative real-time PCR..
46.
2008
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Application of sensitive and specific molecular methods to uncover global dissemination of the major RDRio Sublineage of the Latin American-Mediterranean Mycobacterium tuberculosis spoligotype family..
46.
2008
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Geographic and temporal trends in isolation and antifungal susceptibility of Candida parapsilosis: a global assessment from the ARTEMIS DISK Antifungal Surveillance Program, 2001 to 2005..
46.
2008
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Sputum smear microscopy: evaluation of impact of training, microscope distribution, and use of external quality assessment guidelines for resource-poor settings..
46.
2008
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Candida krusei, a multidrug-resistant opportunistic fungal pathogen: geographic and temporal trends from the ARTEMIS DISK Antifungal Surveillance Program, 2001 to 2005..
46.
2007
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Potential of a simplified p24 assay for early diagnosis of infant human immunodeficiency virus type 1 infection in Haiti..
45.
2007
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Multiplexed identification of blood-borne bacterial pathogens by use of a novel 16S rRNA gene PCR-ligase detection reaction-capillary electrophoresis assay..
45.
2007
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Frequent occult infection with Cytomegalovirus in cardiac transplant recipients despite antiviral prophylaxis..
45.
2007
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Multicenter evaluation of the new VITEK 2 advanced colorimetric yeast identification card..
45.
2007
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Prevalence and antibacterial susceptibility of mef(A)-positive macrolide-resistant Streptococcus pneumoniae over 4 years (2000 to 2004) of the PROTEKT US Study..
45.
2006
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Candida guilliermondii, an opportunistic fungal pathogen with decreased susceptibility to fluconazole: geographic and temporal trends from the ARTEMIS DISK antifungal surveillance program..
44.
2006
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Candida rugosa, an emerging fungal pathogen with resistance to azoles: geographic and temporal trends from the ARTEMIS DISK antifungal surveillance program..
44.
2006
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Characterization and comparison of galactomannan enzyme immunoassay and quantitative real-time PCR assay for detection of Aspergillus fumigatus in bronchoalveolar lavage fluid from experimental invasive pulmonary aspergillosis..
44.
2006
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Comparative study of the new colorimetric VITEK 2 yeast identification card versus the older fluorometric card and of CHROMagar Candida as a source medium with the new card..
44.
2006
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Rapid, noninvasive diagnosis of visceral leishmaniasis in India: comparison of two immunochromatographic strip tests for detection of anti-K39 antibody..
44.
2006
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Use of quantitative real-time PCR to study the kinetics of extracellular DNA released from Candida albicans, with implications for diagnosis of invasive Candidiasis..
44.
2006
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CHROMagar Candida as the sole primary medium for isolation of yeasts and as a source medium for the rapid-assimilation-of-trehalose test..
43.
2005
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Detection of galactomannan antigenemia in patients receiving piperacillin-tazobactam and correlations between in vitro, in vivo, and clinical properties of the drug-antigen interaction..
42.
2004
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Emergence of vanA Genotype Vancomycin-Resistant Enterococci with Low or Moderate Levels of Teicoplanin Resistance in Korea..
42.
2004
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Identification of Bordetella pertussis in a critically ill human immunodeficiency virus-infected patient by direct genotypical analysis of Gram-stained material and discrimination from B. holmesii by using a unique recA gene restriction enzyme site..
42.
2004
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International clones of methicillin-resistant Staphylococcus aureus in two hospitals in Miami, Florida..
42.
2004
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Development and validation of a quantitative real-time PCR assay using fluorescence resonance energy transfer technology for detection of Aspergillus fumigatus in experimental invasive pulmonary aspergillosis..
41.
2003
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Snapshot of moving and expanding clones of Mycobacterium tuberculosis and their global distribution assessed by spoligotyping in an international study..
41.
2003
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Evolution of a vancomycin-intermediate Staphylococcus aureus strain in vivo: multiple changes in the antibiotic resistance phenotypes of a single lineage of methicillin-resistant S. aureus under the impact of antibiotics administered for chemotherapy..
41.
2003
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Molecular characterization and drug resistance patterns of strains of Mycobacterium tuberculosis isolated from patients in an AIDS counseling center in Port-au-Prince, Haiti: a 1-year study..
41.
2003
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Frequent recovery of a single clonal type of multidrug-resistant Staphylococcus aureus from patients in two hospitals in Taiwan and China..
41.
2003
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Pilot study of the genetic diversity of the pneumococcal nasopharyngeal flora among children attending day care centers..
40.
2002
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Analysis of sequences and loci of p44 homologs expressed by Anaplasma phagocytophila in acutely infected patients..
40.
2002
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Comparison of four antiseptic preparations for skin in the prevention of contamination of percutaneously drawn blood cultures: a randomized trial..
40.
2002
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Western blot analysis of sera reactive to human monocytic ehrlichiosis and human granulocytic ehrlichiosis agents..
39.
2001
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Nomenclature of major antimicrobial-resistant clones of Streptococcus pneumoniae defined by the pneumococcal molecular epidemiology network..
39.
2001
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Genetic diversity and clonal patterns among antibiotic-susceptible and -resistant Streptococcus pneumoniae colonizing children: day care centers as autonomous epidemiological units..
38.
2000
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Cutaneous microenvironment of human immunodeficiency virus (HIV)-seropositive and HIV-seronegative individuals, with special reference to Staphylococcus aureus colonization..
38.
2000
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Molecular evolution in a multidrug-resistant lineage of Streptococcus pneumoniae: emergence of strains belonging to the serotype 6B Icelandic clone that lost antibiotic resistance traits..
38.
2000
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Serology of culture-confirmed cases of human granulocytic ehrlichiosis..
38.
2000
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Prophage carriage as a molecular epidemiological marker in Streptococcus pneumoniae..
37.
1999
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Molecular characterization of penicillin-resistant Streptococcus pneumoniae isolates from Bulgaria..
37.
1999
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Molecular epidemiology of penicillin-resistant Streptococcus pneumoniae isolates recovered in Italy from 1993 to 1996..
36.
1998
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Cloning and expression of the 44-kilodalton major outer membrane protein gene of the human granulocytic ehrlichiosis agent and application of the recombinant protein to serodiagnosis..
36.
1998
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Comparison of major antigenic proteins of six strains of the human granulocytic ehrlichiosis agent by Western immunoblot analysis..
35.
1997
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Detection of endocervical anti-Chlamydia trachomatis immunoglobulin A in pregnant women by a rapid, 6-minute enzyme-linked immunosorbent assay: comparison with PCR and chlamydial antigen detection methods..
35.
1997
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Four-day incubation period for blood culture bottles processed with the Difco ESP blood culture system..
35.
1997
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Interpretive criteria and quality control parameters for testing of susceptibilities of Haemophilus influenzae and Streptococcus pneumoniae to trimethoprim and trimethoprim-sulfamethoxazole. The Antimicrobial Susceptibility Testing OC Group..
35.
1997
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Methicillin-resistant Staphylococcus aureus isolates recovered from a New York City hospital: analysis by molecular fingerprinting techniques..
34.
1996
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Geographic spread of epidemic multiresistant Staphylococcus aureus clone in Brazil..
33.
1995
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Evidence for the geographic spread of a methicillin-resistant Staphylococcus aureus clone between Portugal and Spain..
33.
1995
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Spread and maintenance of a dominant methicillin-resistant Staphylococcus aureus (MRSA) clone during an outbreak of MRSA disease in a Spanish hospital..
32.
1994
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Seroprevalence of helicobacter pylori infection in couples..
29.
1991
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Quality control criteria for testing the susceptibility of anaerobic bacteria to meropenem..
28.
1990
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Resistance to serum bactericidal activity distinguishes Brazilian purpuric fever (BPF) case strains of Haemophilus influenzae biogroup aegyptius (H. aegyptius) from non-BPF strains. Brazilian Purpuric Fever Study Group..
27.
1989
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Variation in penicillin-binding protein patterns of penicillin-resistant clinical isolates of pneumococci..
27.
1989
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DNA probe for identification of Streptococcus pneumoniae..
27.
1989
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Quantification of immunoglobulin on electrophoretic immunoblot strips as a tool for human immunodeficiency virus serodiagnosis..
26.
1988
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Specificities and sensitivities of three systems for determination of antibodies to human immunodeficiency virus by electrophoretic immunoblotting..
26.
1988
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Immunization of elderly people with two doses of influenza vaccine..
25.
1987
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Association of infection caused by Pseudomonas aeruginosa serotype O11 with intravenous abuse of pentazocine mixed with tripelennamine..
20.
1984
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Testicular cultivation of Treponema pallidum (Nichols strains) facilitated by sustained-release steroid administration..
10.
1979
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Integration of whole-genome sequencing into infection control practices: the potential and the hurdles..
53.
2015
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Reply to "risks of 'blind' automated identification systems in medical microbiology"..
51.
2013
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Decreased susceptibility to polymyxin B during treatment for carbapenem-resistant Klebsiella pneumoniae infection..
47.
2009
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Potential of Inaccurate Cefiderocol Susceptibility Results: a CLSI AST Subcommittee Advisory.
2023
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Mapping of Microbiological Procedures by the Members of the International Society of Orthopaedic Centers (ISOC) for Diagnosis of Periprosthetic Infections.
2016
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Can You Speciate This for Me? A Micro-Comic Strip..
57.
2019
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Answer to December 2016 Photo Quiz..
54.
2016
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Ultrasensitive Diagnostics for Low-Density Asymptomatic Plasmodium falciparum Infections in Low-Transmission Settings.
2021
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Assessing Clinical Microbiology Practice Guidelines: American Society for Microbiology Ad Hoc Committee on Evidence-Based Laboratory Medicine Practice Guidelines Assessment.
2017
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Babesia microti: from Mice to Ticks to an Increasing Number of Highly Susceptible Humans.
2017
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