selected publications
- Correlates of Mental Health Symptoms Among US Adults During COVID-19, March-April 2020. Public health reports (Washington, D.C. : 1974). 2020 Academic Article GET IT
- Using electronic health records for population health sciences: a case study to evaluate the associations between changes in left ventricular ejection fraction and the built environment. JAMIA open. 2020 Academic Article GET IT
- Healthcare utilization patterns among persons who use drugs during the COVID-19 pandemic. Journal of substance abuse treatment. 2020 Academic Article GET IT
- Healthcare utilization among patients with psychiatric hospitalization admitted through the emergency department (ED): A claims-based study. General hospital psychiatry. 2020 Academic Article GET IT
- Development and validation of a machine learning algorithm for predicting the risk of postpartum depression among pregnant women. Journal of affective disorders. 2020 Academic Article GET IT
- Dissecting clinical heterogeneity of bipolar disorder using multiple polygenic risk scores. Translational psychiatry. 2020 Academic Article GET IT
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Data-driven discovery of probable Alzheimer's disease and related dementia subphenotypes using electronic health records.
Learning health systems.
2020
Academic Article
GET IT
Times cited: 1 -
Subphenotyping depression using machine learning and electronic health records.
Learning health systems.
2020
Academic Article
GET IT
Times cited: 1 - Performance of Electronic Health Record Diagnosis Codes for Ambulatory Heart Failure Encounters. Journal of cardiac failure. 2020 Academic Article GET IT
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Toward cross-platform electronic health record-driven phenotyping using Clinical Quality Language.
Learning health systems.
2020
Academic Article
GET IT
Times cited: 1 -
Deep learning in mental health outcome research: a scoping review.
Translational psychiatry.
2020
Review
GET IT
Times cited: 3 -
Multimodal mental health analysis in social media.
PloS one.
2020
Academic Article
GET IT
Times cited: 1 -
Considerations for Improving the Portability of Electronic Health Record-Based Phenotype Algorithms.
AMIA ... Annual Symposium proceedings. AMIA Symposium.
2020
Academic Article
GET IT
Times cited: 2 - Evaluating the Portability of an NLP System for Processing Echocardiograms: A Retrospective, Multi-site Observational Study. AMIA ... Annual Symposium proceedings. AMIA Symposium. 2020 Academic Article GET IT
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Personal Life Events-A Promising Dimension for Psychiatry in Electronic Health Records.
JAMA psychiatry.
2020
Article
GET IT
Times cited: 2 -
Identifying sub-phenotypes of acute kidney injury using structured and unstructured electronic health record data with memory networks.
Journal of biomedical informatics.
2020
Academic Article
GET IT
Times cited: 2 -
Developing a FHIR-based EHR phenotyping framework: A case study for identification of patients with obesity and multiple comorbidities from discharge summaries.
Journal of biomedical informatics.
2019
Academic Article
GET IT
Times cited: 3 -
Stratified Mortality Prediction of Patients with Acute Kidney Injury in Critical Care.
Studies in health technology and informatics.
2019
Conference Paper
GET IT
Times cited: 1 -
Using Electronic Health Records and Machine Learning to Predict Postpartum Depression.
Studies in health technology and informatics.
2019
Conference Paper
GET IT
Times cited: 3 -
Social determinants of health in mental health care and research: a case for greater inclusion.
Journal of the American Medical Informatics Association : JAMIA.
2019
Information Resource
GET IT
Times cited: 2 -
Underserved populations with missing race ethnicity data differ significantly from those with structured race/ethnicity documentation.
Journal of the American Medical Informatics Association : JAMIA.
2019
Academic Article
GET IT
Times cited: 7 -
Drug knowledge bases and their applications in biomedical informatics research.
Briefings in bioinformatics.
2019
Academic Article
GET IT
Times cited: 6 -
A Trans-Ethnic Genome-Wide Association Study of Uterine Fibroids.
Frontiers in genetics.
2019
Academic Article
GET IT
Times cited: 3 - Predictive Modeling of the Risk of Acute Kidney Injury in Critical Care: A Systematic Investigation of The Class Imbalance Problem. AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science. 2019 Academic Article GET IT
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Developing a portable natural language processing based phenotyping system.
BMC medical informatics and decision making.
2019
Academic Article
GET IT
Times cited: 8 -
Ascertaining Depression Severity by Extracting Patient Health Questionnaire-9 (PHQ-9) Scores from Clinical Notes.
AMIA ... Annual Symposium proceedings. AMIA Symposium.
2018
Academic Article
GET IT
Times cited: 3 -
A case study evaluating the portability of an executable computable phenotype algorithm across multiple institutions and electronic health record environments.
Journal of the American Medical Informatics Association : JAMIA.
2018
Academic Article
GET IT
Times cited: 8 -
Association networks in a matched case-control design - Co-occurrence patterns of preexisting chronic medical conditions in patients with major depression versus their matched controls.
Journal of biomedical informatics.
2018
Academic Article
GET IT
Times cited: 2 - Using electronic health records to characterize prescription patterns: focus on antidepressants in nonpsychiatric outpatient settings. JAMIA open. 2018 Academic Article GET IT
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The Role of Next-Generation Sequencing in Precision Medicine: A Review of Outcomes in Oncology.
Journal of personalized medicine.
2018
Academic Article
GET IT
Times cited: 24 -
The potential value of social determinants of health in predicting health outcomes.
Journal of the American Medical Informatics Association : JAMIA.
2018
Letter
GET IT
Times cited: 2 - CATCH-KB: Establishing a Pharmacogenomics Variant Repository for Chemotherapy-Induced Cardiotoxicity. AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science. 2018 Academic Article GET IT
- From Sour Grapes to Low-Hanging Fruit: A Case Study Demonstrating a Practical Strategy for Natural Language Processing Portability. AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science. 2018 Academic Article GET IT
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A Framework for Data Quality Assessment in Clinical Research Datasets.
AMIA ... Annual Symposium proceedings. AMIA Symposium.
2018
Academic Article
GET IT
Times cited: 5 -
Secondary Use of Patients' Electronic Records (SUPER): An Approach for Meeting Specific Data Needs of Clinical and Translational Researchers.
AMIA ... Annual Symposium proceedings. AMIA Symposium.
2018
Academic Article
GET IT
Times cited: 14 - Understanding the research landscape of major depressive disorder via literature mining: an entity-level analysis of PubMed data from 1948 to 2017. JAMIA open. 2018 Academic Article GET IT
- Risk Factors for Depression Among Civilians After the 9/11 World Trade Center Terrorist Attacks: A Systematic Review and Meta-Analysis. PLoS currents. 2018 Academic Article GET IT
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Electronic Health Record Phenotypes for Precision Medicine: Perspectives and Caveats From Treatment of Breast Cancer at a Single Institution.
Clinical and translational science.
2018
Academic Article
GET IT
Times cited: 6 - Prototype Development: Context-Driven Dynamic XML Ophthalmologic Data Capture Application. JMIR medical informatics. 2017 Academic Article GET IT
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Semi-Supervised Approach to Monitoring Clinical Depressive Symptoms in Social Media.
Proceedings of the ... IEEE/ACM International Conference on Advances in Social Network Analysis and Mining. IEEE/ACM International Conference on Advances in Social Network Analysis and Mining.
2017
Conference Paper
GET IT
Times cited: 26 - D2Refine: A Platform for Clinical Research Study Data Element Harmonization and Standardization. AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science. 2017 Academic Article GET IT
- Automated Diabetes Case Identification Using Electronic Health Record Data at a Tertiary Care Facility. Mayo Clinic proceedings. Innovations, quality & outcomes. 2017 Academic Article GET IT
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Measuring the impact of ambulatory red blood cell transfusion on home functional status: study protocol for a pilot randomized controlled trial.
Trials.
2017
Academic Article
GET IT
Times cited: 2 -
Genome-wide study of resistant hypertension identified from electronic health records.
PloS one.
2017
Academic Article
GET IT
Times cited: 16 -
Identification of unique venous thromboembolism-susceptibility variants in African-Americans.
Thrombosis and haemostasis.
2017
Academic Article
GET IT
Times cited: 12 -
Time to achieving therapeutic international normalized ratio increases hospital length of stay after heart valve replacement surgery.
American heart journal.
2017
Academic Article
GET IT
Times cited: 3 -
Increased risk of hospitalization for ultrarapid metabolizers of cytochrome P450 2D6.
Pharmacogenomics and personalized medicine.
2017
Academic Article
GET IT
Times cited: 7 -
Improving risk prediction for depression via Elastic Net regression - Results from Korea National Health Insurance Services Data.
AMIA ... Annual Symposium proceedings. AMIA Symposium.
2017
Academic Article
GET IT
Times cited: 5 -
Predicting Prolonged Stay in the ICU Attributable to Bleeding in Patients Offered Plasma Transfusion.
AMIA ... Annual Symposium proceedings. AMIA Symposium.
2017
Academic Article
GET IT
Times cited: 3 -
Standardized Representation of Clinical Study Data Dictionaries with CIMI Archetypes.
AMIA ... Annual Symposium proceedings. AMIA Symposium.
2017
Academic Article
GET IT
Times cited: 2 - Developing a modular architecture for creation of rule-based clinical diagnostic criteria. BioData mining. 2016 Academic Article GET IT
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Practical considerations for implementing genomic information resources. Experiences from eMERGE and CSER.
Applied clinical informatics.
2016
Academic Article
GET IT
Times cited: 13 -
Minimum information required for a DMET experiment reporting.
Pharmacogenomics.
2016
Academic Article
GET IT
Times cited: 4 -
Leveraging electronic health records to study pleiotropic effects on bipolar disorder and medical comorbidities.
Translational psychiatry.
2016
Academic Article
GET IT
Times cited: 5 - A Decompositional Approach to Executing Quality Data Model Algorithms on the i2b2 Platform. AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science. 2016 Academic Article GET IT
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Developing a data element repository to support EHR-driven phenotype algorithm authoring and execution.
Journal of biomedical informatics.
2016
Academic Article
GET IT
Times cited: 5 -
Clinical phenotyping in selected national networks: demonstrating the need for high-throughput, portable, and computational methods.
Artificial intelligence in medicine.
2016
Academic Article
GET IT
Times cited: 34 -
Quantifying the impact of chronic conditions on a diagnosis of major depressive disorder in adults: a cohort study using linked electronic medical records.
BMC psychiatry.
2016
Academic Article
GET IT
Times cited: 19 -
PheKB: a catalog and workflow for creating electronic phenotype algorithms for transportability.
Journal of the American Medical Informatics Association : JAMIA.
2016
Academic Article
GET IT
Times cited: 90 -
Improvement in Cardiovascular Risk Prediction with Electronic Health Records.
Journal of cardiovascular translational research.
2016
Academic Article
GET IT
Times cited: 16 -
The phenotypic legacy of admixture between modern humans and Neandertals.
Science (New York, N.Y.).
2016
Academic Article
GET IT
Times cited: 120 -
Developing EHR-driven heart failure risk prediction models using CPXR(Log) with the probabilistic loss function.
Journal of biomedical informatics.
2016
Academic Article
GET IT
Times cited: 27 - Practical considerations in genomic decision support: The eMERGE experience. Journal of pathology informatics. 2015 Academic Article GET IT
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Desiderata for computable representations of electronic health records-driven phenotype algorithms.
Journal of the American Medical Informatics Association : JAMIA.
2015
Academic Article
GET IT
Times cited: 55 - A conceptual model for translating omic data into clinical action. Journal of pathology informatics. 2015 Academic Article GET IT
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Health behaviors and quality of life predictors for risk of hospitalization in an electronic health record-linked biobank.
International journal of general medicine.
2015
Academic Article
GET IT
Times cited: 4 -
Ensemble learning approaches to predicting complications of blood transfusion.
Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference.
2015
Conference Paper
GET IT
Times cited: 10 - ePhenotyping for Abdominal Aortic Aneurysm in the Electronic Medical Records and Genomics (eMERGE) Network: Algorithm Development and Konstanz Information Miner Workflow. International journal of biomedical data mining. 2015 Academic Article GET IT
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Review and evaluation of electronic health records-driven phenotype algorithm authoring tools for clinical and translational research.
Journal of the American Medical Informatics Association : JAMIA.
2015
Academic Article
GET IT
Times cited: 16 -
Approaching patient engagement in research: what do patients with cardiovascular disease think?.
Patient preference and adherence.
2015
Comment
GET IT
Times cited: 6 -
A Robust e-Epidemiology Tool in Phenotyping Heart Failure with Differentiation for Preserved and Reduced Ejection Fraction: the Electronic Medical Records and Genomics (eMERGE) Network.
Journal of cardiovascular translational research.
2015
Academic Article
GET IT
Times cited: 14 -
Quantifying the importance of disease burden on perceived general health and depressive symptoms in patients within the Mayo Clinic Biobank.
Health and quality of life outcomes.
2015
Academic Article
GET IT
Times cited: 9 - A Modular Architecture for Electronic Health Record-Driven Phenotyping. AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science. 2015 Academic Article GET IT
- A Prototype for Executable and Portable Electronic Clinical Quality Measures Using the KNIME Analytics Platform. AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science. 2015 Academic Article GET IT
- Studying the Confounding Effects of Socio-Ecological Conditions in Retrospective Clinical Research: A Use Case of Social Stress. AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science. 2015 Academic Article GET IT
- Leveraging an Electronic Health Record-Linked Biorepository to Generate a Metformin Pharmacogenomics Hypothesis. AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science. 2015 Academic Article GET IT
- A Pilot Study on Modeling of Diagnostic Criteria Using OWL and SWRL. Studies in health technology and informatics. 2015 Conference Paper GET IT
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A Standards-based Semantic Metadata Repository to Support EHR-driven Phenotype Authoring and Execution.
Studies in health technology and informatics.
2015
Conference Paper
GET IT
Times cited: 4 -
Characterizing the epidemiology of perioperative transfusion-associated circulatory overload.
Anesthesiology.
2015
Conference Paper
GET IT
Times cited: 70 -
Characterizing the epidemiology of postoperative transfusion-related acute lung injury.
Anesthesiology.
2015
Academic Article
GET IT
Times cited: 63 -
Clinical Decision Support to Implement CYP2D6 Drug-Gene Interaction.
Studies in health technology and informatics.
2015
Conference Paper
GET IT
Times cited: 3 -
Developing a Standards-Based Information Model for Representing Computable Diagnostic Criteria: A Feasibility Study of the NQF Quality Data Model.
Studies in health technology and informatics.
2015
Conference Paper
GET IT
Times cited: 2 -
Effects of Plasma Transfusion on Perioperative Bleeding Complications: A Machine Learning Approach.
Studies in health technology and informatics.
2015
Conference Paper
GET IT
Times cited: 4 -
Using EHR-Linked Biobank Data to Study Metformin Pharmacogenomics.
Studies in health technology and informatics.
2015
Conference Paper
GET IT
Times cited: 2 -
Using EHRs and Machine Learning for Heart Failure Survival Analysis.
Studies in health technology and informatics.
2015
Conference Paper
GET IT
Times cited: 38 -
Using EHRs for Heart Failure Therapy Recommendation Using Multidimensional Patient Similarity Analytics.
Studies in health technology and informatics.
2015
Conference Paper
GET IT
Times cited: 13 -
Genetic variants associated with serum thyroid stimulating hormone (TSH) levels in European Americans and African Americans from the eMERGE Network.
PloS one.
2014
Academic Article
GET IT
Times cited: 21 -
Analysis of online information searching for cardiovascular diseases on a consumer health information portal.
AMIA ... Annual Symposium proceedings. AMIA Symposium.
2014
Academic Article
GET IT
Times cited: 2 -
Scalable and High-Throughput Execution of Clinical Quality Measures from Electronic Health Records using MapReduce and the JBoss® Drools Engine.
AMIA ... Annual Symposium proceedings. AMIA Symposium.
2014
Academic Article
GET IT
Times cited: 3 -
Evaluating the process of online health information searching: a qualitative approach to exploring consumer perspectives.
Journal of medical Internet research.
2014
Academic Article
GET IT
Times cited: 72 - Empowering Personalized Medicine with Big Data and Semantic Web Technology: Promises, Challenges, and Use Cases. Proceedings : ... IEEE International Conference on Big Data. IEEE International Conference on Big Data. 2014 Academic Article GET IT
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Electronic medical records and genomics (eMERGE) network exploration in cataract: several new potential susceptibility loci.
Molecular vision.
2014
Academic Article
GET IT
Times cited: 19 -
Phenome-wide association studies demonstrating pleiotropy of genetic variants within FTO with and without adjustment for body mass index.
Frontiers in genetics.
2014
Academic Article
GET IT
Times cited: 41 -
Comparative analysis of online health queries originating from personal computers and smart devices on a consumer health information portal.
Journal of medical Internet research.
2014
Academic Article
GET IT
Times cited: 23 -
The ATXN2-SH2B3 locus is associated with peripheral arterial disease: an electronic medical record-based genome-wide association study.
Frontiers in genetics.
2014
Academic Article
GET IT
Times cited: 26 -
Design and anticipated outcomes of the eMERGE-PGx project: a multicenter pilot for preemptive pharmacogenomics in electronic health record systems.
Clinical pharmacology and therapeutics.
2014
Academic Article
GET IT
Times cited: 137 -
Design patterns for the development of electronic health record-driven phenotype extraction algorithms.
Journal of biomedical informatics.
2014
Academic Article
GET IT
Times cited: 23 -
An electronic health record driven algorithm to identify incident antidepressant medication users.
Journal of the American Medical Informatics Association : JAMIA.
2014
Academic Article
GET IT
Times cited: 5 - Detecting Associations between Major Depressive Disorder Treatment and Essential Hypertension using Electronic Health Records. AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science. 2014 Academic Article GET IT
- Simplifying complex clinical element models to encourage adoption. AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science. 2014 Academic Article GET IT
- Variation in Cohorts Derived from EHR Data in Four Care Delivery Settings. AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science. 2014 Academic Article GET IT
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Biobanks and personalized medicine.
Clinical genetics.
2014
Review
GET IT
Times cited: 41 -
Online information seeking for cardiovascular diseases: a case study from Mayo Clinic.
Studies in health technology and informatics.
2014
Conference Paper
GET IT
Times cited: 3 -
Preemptive genotyping for personalized medicine: design of the right drug, right dose, right time-using genomic data to individualize treatment protocol.
Mayo Clinic proceedings.
2014
Academic Article
GET IT
Times cited: 172 -
Electronic health records-driven phenotyping: challenges, recent advances, and perspectives.
Journal of the American Medical Informatics Association : JAMIA.
2013
Editorial Article
GET IT
Times cited: 112 -
Systematic comparison of phenome-wide association study of electronic medical record data and genome-wide association study data.
Nature biotechnology.
2013
Academic Article
GET IT
Times cited: 388 -
Normalization and standardization of electronic health records for high-throughput phenotyping: the SHARPn consortium.
Journal of the American Medical Informatics Association : JAMIA.
2013
Academic Article
GET IT
Times cited: 60 -
Some experiences and opportunities for big data in translational research.
Genetics in medicine : official journal of the American College of Medical Genetics.
2013
Review
GET IT
Times cited: 55 -
Hospitalizations and emergency department use in Mayo Clinic Biobank participants within the employee and community health medical home.
Mayo Clinic proceedings.
2013
Academic Article
GET IT
Times cited: 7 -
The Mayo Clinic Biobank: a building block for individualized medicine.
Mayo Clinic proceedings.
2013
Academic Article
GET IT
Times cited: 119 -
Use of computerized algorithm to identify individuals in need of testing for celiac disease.
Journal of the American Medical Informatics Association : JAMIA.
2013
Academic Article
GET IT
Times cited: 19 -
A collaborative approach to developing an electronic health record phenotyping algorithm for drug-induced liver injury.
Journal of the American Medical Informatics Association : JAMIA.
2013
Academic Article
GET IT
Times cited: 38 -
Disambiguation of PharmGKB drug-disease relations with NDF-RT and SPL.
Journal of biomedical informatics.
2013
Academic Article
GET IT
Times cited: 8 - Bias in recording of body mass index data in the electronic health record. AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science. 2013 Academic Article GET IT
- Mining Genotype-Phenotype Associations from Public Knowledge Sources via Semantic Web Querying. AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science. 2013 Academic Article GET IT
- PharmGKB Drug Data Normalization with NDF-RT. AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science. 2013 Academic Article GET IT
- Using association rule mining for phenotype extraction from electronic health records. AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science. 2013 Academic Article GET IT
- Using clinical element models for pharmacogenomic study data standardization. AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science. 2013 Academic Article GET IT
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Genome- and phenome-wide analyses of cardiac conduction identifies markers of arrhythmia risk.
Circulation.
2013
Academic Article
GET IT
Times cited: 115 -
Incorporating expert terminology and disease risk factors into consumer health vocabularies.
Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing.
2013
Conference Paper
GET IT
Times cited: 9 -
Using linked data for mining drug-drug interactions in electronic health records.
Studies in health technology and informatics.
2013
Conference Paper
GET IT
Times cited: 20 -
A semantic-web oriented representation of the clinical element model for secondary use of electronic health records data.
Journal of the American Medical Informatics Association : JAMIA.
2012
Academic Article
GET IT
Times cited: 37 -
Applying semantic web technologies for phenome-wide scan using an electronic health record linked Biobank.
Journal of biomedical semantics.
2012
Academic Article
GET IT
Times cited: 20 -
Harmonization and semantic annotation of data dictionaries from the Pharmacogenomics Research Network: a case study.
Journal of biomedical informatics.
2012
Academic Article
GET IT
Times cited: 6 -
An evaluation of the NQF Quality Data Model for representing Electronic Health Record driven phenotyping algorithms.
AMIA ... Annual Symposium proceedings. AMIA Symposium.
2012
Academic Article
GET IT
Times cited: 23 -
Mining the human phenome using semantic web technologies: a case study for Type 2 Diabetes.
AMIA ... Annual Symposium proceedings. AMIA Symposium.
2012
Academic Article
GET IT
Times cited: 10 -
Modeling and executing electronic health records driven phenotyping algorithms using the NQF Quality Data Model and JBoss® Drools Engine.
AMIA ... Annual Symposium proceedings. AMIA Symposium.
2012
Academic Article
GET IT
Times cited: 26 -
Terminology representation guidelines for biomedical ontologies in the semantic web notations.
Journal of biomedical informatics.
2012
Academic Article
GET IT
Times cited: 12 -
Electronic health record surveillance algorithms facilitate the detection of transfusion-related pulmonary complications.
Transfusion.
2012
Academic Article
GET IT
Times cited: 28 - Using semantic web technologies for cohort identification from electronic health records for clinical research. AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science. 2012 Academic Article GET IT
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Importance of multi-modal approaches to effectively identify cataract cases from electronic health records.
Journal of the American Medical Informatics Association : JAMIA.
2012
Academic Article
GET IT
Times cited: 71 -
Building a robust, scalable and standards-driven infrastructure for secondary use of EHR data: the SHARPn project.
Journal of biomedical informatics.
2012
Academic Article
GET IT
Times cited: 124 -
Integrating VA's NDF-RT drug terminology with PharmGKB: preliminary results.
Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing.
2012
Conference Paper
GET IT
Times cited: 3 -
Validation and discovery of genotype-phenotype associations in chronic diseases using linked data.
Studies in health technology and informatics.
2012
Conference Paper
GET IT
Times cited: 1 -
An OWL meta-ontology for representing the Clinical Element Model.
AMIA ... Annual Symposium proceedings. AMIA Symposium.
2011
Academic Article
GET IT
Times cited: 9 -
Analyzing the heterogeneity and complexity of Electronic Health Record oriented phenotyping algorithms.
AMIA ... Annual Symposium proceedings. AMIA Symposium.
2011
Academic Article
GET IT
Times cited: 52 -
The SHARPn project on secondary use of Electronic Medical Record data: progress, plans, and possibilities.
AMIA ... Annual Symposium proceedings. AMIA Symposium.
2011
Academic Article
GET IT
Times cited: 29 -
Using RxNorm and NDF-RT to classify medication data extracted from electronic health records: experiences from the Rochester Epidemiology Project.
AMIA ... Annual Symposium proceedings. AMIA Symposium.
2011
Academic Article
GET IT
Times cited: 21 -
Variants near FOXE1 are associated with hypothyroidism and other thyroid conditions: using electronic medical records for genome- and phenome-wide studies.
American journal of human genetics.
2011
Academic Article
GET IT
Times cited: 171 -
Mayo Genome Consortia: a genotype-phenotype resource for genome-wide association studies with an application to the analysis of circulating bilirubin levels.
Mayo Clinic proceedings.
2011
Academic Article
GET IT
Times cited: 45 -
Mapping clinical phenotype data elements to standardized metadata repositories and controlled terminologies: the eMERGE Network experience.
Journal of the American Medical Informatics Association : JAMIA.
2011
Academic Article
GET IT
Times cited: 75 -
Electronic medical records for genetic research: results of the eMERGE consortium.
Science translational medicine.
2011
Academic Article
GET IT
Times cited: 204 -
Further revamping VA's NDF-RT drug terminology for clinical research.
Journal of the American Medical Informatics Association : JAMIA.
2011
Letter
GET IT
Times cited: 7 - Evaluating Phenotypic Data Elements for Genetics and Epidemiological Research: Experiences from the eMERGE and PhenX Network Projects. AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science. 2011 Academic Article GET IT
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Use of standard drug vocabularies in clinical research: a case study in pediatrics.
AMIA ... Annual Symposium proceedings. AMIA Symposium.
2010
Academic Article
GET IT
Times cited: 6 -
Comparing and evaluating terminology services application programming interfaces: RxNav, UMLSKS and LexBIG.
Journal of the American Medical Informatics Association : JAMIA.
2010
Academic Article
GET IT
Times cited: 2 -
Leveraging informatics for genetic studies: use of the electronic medical record to enable a genome-wide association study of peripheral arterial disease.
Journal of the American Medical Informatics Association : JAMIA.
2010
Academic Article
GET IT
Times cited: 92 -
Analyzing categorical information in two publicly available drug terminologies: RxNorm and NDF-RT.
Journal of the American Medical Informatics Association : JAMIA.
2010
Academic Article
GET IT
Times cited: 24 - LexRDF Model: An RDF-based Unified Model for Heterogeneous Biomedical Ontologies. CEUR workshop proceedings. 2009 Academic Article GET IT
- Survey of modular ontology techniques and their applications in the biomedical domain. Integrated computer-aided engineering. 2009 Academic Article GET IT
-
LexGrid: a framework for representing, storing, and querying biomedical terminologies from simple to sublime.
Journal of the American Medical Informatics Association : JAMIA.
2009
Academic Article
GET IT
Times cited: 25 -
Formalizing ICD coding rules using Formal Concept Analysis.
Journal of biomedical informatics.
2009
Academic Article
GET IT
Times cited: 21 -
LexValueSets: an approach for context-driven value sets extraction.
AMIA ... Annual Symposium proceedings. AMIA Symposium.
2008
Academic Article
GET IT
Times cited: 4 - Adopting Graph Traversal Techniques for Context-Driven Value Sets Extraction from Biomedical Knowledge Sources. Proceedings. IEEE International Conference on Semantic Computing. 2008 Academic Article GET IT
- Modular Ontology Techniques and their Applications in the Biomedical Domain. Proceedings of the ... IEEE International Conference on Information Reuse and Integration. IEEE International Conference on Information Reuse and Integration. 2008 Academic Article GET IT
- Information Integration from Semantically Heterogeneous Biological Data Sources. International Workshop on Databases and Expert Systems Applications : proceedings. 2005 Academic Article GET IT
- Learning classifiers from semantically heterogeneous data. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 2004 Article